CX289225

Overview
NameCX289225
Unique NameCX289225
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length389
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBM (Chaperone protein dnaK OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 73/129 (56.59%), Postives = 86/129 (66.67%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGV T LI +NT IPT+KSQVF+T  D QT+V I V +GERS+  D + LG+F LSGI PAPRG PQIEVTF++DANGI+NV A+DKGTGK   ITIT     L+             F  EDKK K
Sbjct:  375 TFGGVSTTLIEKNTTIPTRKSQVFSTAADGQTSVEIHVVQGERSMAADNKTLGRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITAST-NLTDDEIEKAVNEAKKFEAEDKKRK 502
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBL (Chaperone protein dnaK OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 73/129 (56.59%), Postives = 86/129 (66.67%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGV T LI +NT IPT+KSQVF+T  D QT+V I V +GERS+  D + LG+F LSGI PAPRG PQIEVTF++DANGI+NV A+DKGTGK   ITIT     L+             F  EDKK K
Sbjct:  375 TFGGVSTTLIEKNTTIPTRKSQVFSTAADGQTSVEIHVVQGERSMAADNKTLGRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITAST-NLTDDEIEKAVNEAKKFEAEDKKRK 502
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBK (Chaperone protein dnaK OS=Clostridium botulinum (strain Okra / Type B1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 73/129 (56.59%), Postives = 86/129 (66.67%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGV T LI +NT IPT+KSQVF+T  D QT+V I V +GERS+  D + LG+F LSGI PAPRG PQIEVTF++DANGI+NV A+DKGTGK   ITIT     L+             F  EDKK K
Sbjct:  375 TFGGVSTTLIEKNTTIPTRKSQVFSTAADGQTSVEIHVVQGERSMAADNKTLGRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITAST-NLTDDEIEKAVNEAKKFEAEDKKRK 502
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBJ (Chaperone protein dnaK OS=Clostridium botulinum (strain Kyoto / Type A2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 73/129 (56.59%), Postives = 86/129 (66.67%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGV T LI +NT IPT+KSQVF+T  D QT+V I V +GERS+  D + LG+F LSGI PAPRG PQIEVTF++DANGI+NV A+DKGTGK   ITIT     L+             F  EDKK K
Sbjct:  375 TFGGVSTTLIEKNTTIPTRKSQVFSTAADGQTSVEIHVVQGERSMAADNKTLGRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITAST-NLTDDEIEKAVNEAKKFEAEDKKRK 502
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBH (Chaperone protein dnaK OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 73/129 (56.59%), Postives = 86/129 (66.67%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGV T LI +NT IPT+KSQVF+T  D QT+V I V +GERS+  D + LG+F LSGI PAPRG PQIEVTF++DANGI+NV A+DKGTGK   ITIT     L+             F  EDKK K
Sbjct:  375 TFGGVSTTLIEKNTTIPTRKSQVFSTAADGQTSVEIHVVQGERSMAADNKTLGRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITAST-NLTDDEIEKAVNEAKKFEAEDKKRK 502
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB6 (Chaperone protein dnaK OS=Clostridium botulinum (strain 657 / Type Ba4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 73/129 (56.59%), Postives = 86/129 (66.67%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGV T LI +NT IPT+KSQVF+T  D QT+V I V +GERS+  D + LG+F LSGI PAPRG PQIEVTF++DANGI+NV A+DKGTGK   ITIT     L+             F  EDKK K
Sbjct:  375 TFGGVSTTLIEKNTTIPTRKSQVFSTAADGQTSVEIHVVQGERSMAADNKTLGRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITAST-NLTDDEIEKAVNEAKKFEAEDKKRK 502
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB1 (Chaperone protein dnaK OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 73/129 (56.59%), Postives = 86/129 (66.67%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGV T LI +NT IPT+KSQVF+T  D QT+V I V +GERS+  D + LG+F LSGI PAPRG PQIEVTF++DANGI+NV A+DKGTGK   ITIT     L+             F  EDKK K
Sbjct:  375 TFGGVSTTLIEKNTTIPTRKSQVFSTAADGQTSVEIHVVQGERSMAADNKTLGRFTLSGIAPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEANITITAST-NLTDDEIEKAVNEAKKFEAEDKKRK 502
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT3 (Chaperone protein dnaK OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 68/129 (52.71%), Postives = 87/129 (67.44%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTKLI  NT IPTKK + F+T  D QT+V I + +GER ++ D + LG+F L GIPPAPRG PQIEV F++DANGIL+V A+DK TGK + + I    G+LS+             A+EDKK K
Sbjct:  396 TLGGVMTKLIEANTTIPTKKQETFSTAADNQTSVEIHILQGERPMSTDNKTLGRFHLDGIPPAPRGVPQIEVAFDIDANGILHVSAKDKATGKEQSVRI-EASGKLSETEIEKMKKDASSHADEDKKKK 523
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURPS (Chaperone protein dnaK OS=Burkholderia pseudomallei GN=dnaK PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURP6 (Chaperone protein dnaK OS=Burkholderia pseudomallei (strain 668) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLR 531
The following BLAST results are available for this feature:
BLAST of CX289225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOBM5.892e-3256.59Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBL5.892e-3256.59Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBK5.892e-3256.59Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBJ5.892e-3256.59Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBH5.892e-3256.59Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOB65.892e-3256.59Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOB15.892e-3256.59Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CHLT35.892e-3252.71Chaperone protein dnaK OS=Chloroherpeton thalassiu... [more]
DNAK_BURPS5.892e-3254.26Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURP65.892e-3254.26Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]

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Properties
Property NameValue
Genbank descriptionC02010F02SK IF1 Citrus clementina cDNA clone C02010F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289225 ID=CX289225; Name=CX289225; organism=Citrus clementina; type=EST; length=389bp
AGACAGTTGGTGGGGTGATGACCAAGTTGATCCCAAGAAACACGGTCATT
CCAACCAAGAAATCTCAAGTTTTCACCACTTATCAAGACCAGCAGACTAC
AGTTTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGATTGCA
GATTGCTTGGGAAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGGA
ACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAAA
TGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATCA
CAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGAGCGTATGGTTCGT
GAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAG
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