CX289225

Overview
NameCX289225
Unique NameCX289225
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length389
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURP1 (Chaperone protein dnaK OS=Burkholderia pseudomallei (strain 1710b) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURP0 (Chaperone protein dnaK OS=Burkholderia pseudomallei (strain 1106a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURMS (Chaperone protein dnaK OS=Burkholderia mallei (strain SAVP1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURMA (Chaperone protein dnaK OS=Burkholderia mallei GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURM9 (Chaperone protein dnaK OS=Burkholderia mallei (strain NCTC 10229) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURM7 (Chaperone protein dnaK OS=Burkholderia mallei (strain NCTC 10247) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURCJ (Chaperone protein dnaK OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIDQMIKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURCH (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain HI2424) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIDQMIKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURCC (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain MC0-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIDQMIKDAEANAAEDHKLR 531
[Close]
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: DNAK_BURCA (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain AU 1054) GN=dnaK PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.892e-32
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 3 
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T+GGVMTK+I +NT IPTK +QV++T  D Q  V+I+VF+GER +    +LLG+F+L GIPPAPRG PQIEVTF++DANGIL+V A+DK TGK  KITI  + G LS+             A ED K++
Sbjct:  404 TLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIDQMIKDAEANAAEDHKLR 531
The following BLAST results are available for this feature:
BLAST of CX289225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BURP15.892e-3254.26Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURP05.892e-3254.26Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURMS5.892e-3254.26Chaperone protein dnaK OS=Burkholderia mallei (str... [more]
DNAK_BURMA5.892e-3254.26Chaperone protein dnaK OS=Burkholderia mallei GN=d... [more]
DNAK_BURM95.892e-3254.26Chaperone protein dnaK OS=Burkholderia mallei (str... [more]
DNAK_BURM75.892e-3254.26Chaperone protein dnaK OS=Burkholderia mallei (str... [more]
DNAK_BURCJ5.892e-3254.26Chaperone protein dnaK OS=Burkholderia cepacia (st... [more]
DNAK_BURCH5.892e-3254.26Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCC5.892e-3254.26Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCA5.892e-3254.26Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]

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Properties
Property NameValue
Genbank descriptionC02010F02SK IF1 Citrus clementina cDNA clone C02010F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289225 ID=CX289225; Name=CX289225; organism=Citrus clementina; type=EST; length=389bp
AGACAGTTGGTGGGGTGATGACCAAGTTGATCCCAAGAAACACGGTCATT
CCAACCAAGAAATCTCAAGTTTTCACCACTTATCAAGACCAGCAGACTAC
AGTTTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGATTGCA
GATTGCTTGGGAAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGGA
ACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAAA
TGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATCA
CAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGAGCGTATGGTTCGT
GAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAG
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