CX289225

Overview
NameCX289225
Unique NameCX289225
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length389
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 164.851 bits (416), Expect = 1.184e-40
Identity = 81/126 (64.29%), Postives = 96/126 (76.19%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDK 380
            T GGVMT LI RN+ IPTK++Q+FTTY D Q  V IQV+EGER++TKD  LLG+F+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+            +  ED+
Sbjct:  405 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDE 530          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.184e-40
Identity = 82/127 (64.57%), Postives = 98/127 (77.17%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GGVMTKLI RN+ IP K++++F+TY D Q  VSIQVFEGER++TKD  LLG+FDLSGIPPAPRG PQIEVTF++DANGILNV A+DK +GK + ITI NDKGRLSQ            + EED+K
Sbjct:  404 TAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILNVAAKDKSSGKEKNITIKNDKGRLSQADIDRMVSEAEKYREEDEK 530          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.184e-40
Identity = 81/126 (64.29%), Postives = 96/126 (76.19%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDK 380
            T GGVMT LI RN+ IPTK++Q+FTTY D Q  V IQV+EGER++TKD  LLG+FDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+            +  ED+
Sbjct:  407 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDE 532          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.547e-40
Identity = 83/129 (64.34%), Postives = 95/129 (73.64%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GG MT LIPRNT IPTKK QVF+TY D Q  V IQV+EGER+ TKD  LLGKF+LSGIPPAPRG PQI V F++DANGILNV AEDK TG+  KITITNDKGRLS+            +  ED+++K
Sbjct:  411 TAGGGMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELK 539          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.547e-40
Identity = 82/127 (64.57%), Postives = 95/127 (74.80%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GGVMT LI RNT IPTK++QVF+TY D Q  V IQV+EGER++TKD  LLGKFDL+GIPPAPRG PQIEVTF++DANGILNV A DK TG   KITITNDKGRLS+            +  ED++
Sbjct:  407 TAGGVMTALIKRNTTIPTKQTQVFSTYADNQPGVLIQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGNENKITITNDKGRLSKEDIERMVQEAEKYKAEDEQ 533          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.547e-40
Identity = 82/129 (63.57%), Postives = 94/129 (72.87%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGVMT LIPRNT IPTKK Q+F+TY D Q  V IQVFEGER+ TKD  LLGKF+L+GIPPAPRG PQ+ V F++DANGILNV AEDK  G   KITITNDKGRLS+            +  ED++VK
Sbjct:  410 TAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVK 538          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.547e-40
Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQ 326
            T GGVMT LI RNT IP+K++Q FTTY D Q  V IQV+EGER++TKD  LLGKF+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+
Sbjct:  407 TAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSK 514          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 1.547e-40
Identity = 82/129 (63.57%), Postives = 95/129 (73.64%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGVMT LIPRNT IPTKK QVF+TY D Q  V IQV+EGER+ TKD  LLGKF+L+GIPPAPRG PQI V F++DANGILNV AEDK TG   KITITNDKGRLS+            +  +D+++K
Sbjct:  411 TAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVIFDIDANGILNVSAEDKTTGNKNKITITNDKGRLSKDEIERMVQEAEKYKADDEQLK 539          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 2.020e-40
Identity = 81/126 (64.29%), Postives = 95/126 (75.40%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDK 380
            T GGVMT LI RN+ IPTK++Q+FTTY D Q  V IQV+EGER++TKD  LLG+FDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+            +  ED+
Sbjct:  407 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKVNKITITNDKGRLSKEEIERMVLDAEKYKAEDE 532          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.639e-40
Identity = 80/126 (63.49%), Postives = 96/126 (76.19%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDK 380
            T GGVMT LI RN+ IPTK++Q+FTTY D Q  V IQV+EGER++T+D  LLG+F+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK+ KITITNDKGRLS+            +  ED+
Sbjct:  405 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDE 530          
The following BLAST results are available for this feature:
BLAST of CX289225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_HUMAN1.184e-4064.29Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP71_ANOAL1.184e-4064.57Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HS71L_MACFA1.184e-4064.29Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP7C_PETHY1.547e-4064.34Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP71_ORYLA1.547e-4064.57Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP70_SOYBN1.547e-4063.57Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_ONCTS1.547e-4074.07Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP70_CHLRE1.547e-4063.57Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HS71L_HUMAN2.020e-4064.29Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP71_CANFA2.639e-4063.49Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02010F02SK IF1 Citrus clementina cDNA clone C02010F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289225 ID=CX289225; Name=CX289225; organism=Citrus clementina; type=EST; length=389bp
AGACAGTTGGTGGGGTGATGACCAAGTTGATCCCAAGAAACACGGTCATT
CCAACCAAGAAATCTCAAGTTTTCACCACTTATCAAGACCAGCAGACTAC
AGTTTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGATTGCA
GATTGCTTGGGAAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGGA
ACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAAA
TGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATCA
CAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGAGCGTATGGTTCGT
GAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAG
back to top