CX289237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.511e-26 Identity = 63/120 (52.50%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 30 AFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 389 AF+QI N A RY SG F L +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+PED+Y++PL +AEV+R+G DIT++ Sbjct: 90 AFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPEDEYLIPLDKAEVVRKGKDITIL 207
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 2.119e-25 Identity = 59/144 (40.97%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 FG + D + + A+ RYRSG ++ +T+R+P+G H H+ S E PG+KVVIP +P AKGLL+S IRD +PVVF E LYR +EVPE++Y + L +A+V REG+D++++ +GA + +A + EK Sbjct: 84 FGFVYEVMDSVSGQMARMRYRSGGRWT-SPVTIRSPFGGGVHTPELHADSLEGLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQEVPEEEYTIELGKADVKREGTDLSIITYGAMVHESLKAADELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_PSEAE (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas aeruginosa GN=bkdA2 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.119e-25 Identity = 63/159 (39.62%), Postives = 93/159 (58.49%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLY----------------RLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQAC----LDAE 440 +PA DQ+++EAA+ RYRS F +TVR P G +GG HSQSPEA F V GL+ V+P +P AKGLL++CI + +PV+F EPK LY + +VP+ Y +PL +A ++R G+ +T++ +G + + + A LDAE Sbjct: 101 YPASDQLISEAARLRYRSAGDFIVP-MTVRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIACIENDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPASQVPDGYYKVPLDKAAIVRPGAALTVLTYGTMVYVAQAAADETGLDAE 258
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 2.119e-25 Identity = 61/131 (46.56%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 33 FDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 425 FDQ++N+ AKFRY G + +TVR YGA HSQS F +PGLK V+P +P AKGLLL+ I D +PV FFE K Y + EVPED Y +PL +A++ REG+D+TL G Q++ +A Sbjct: 104 FDQVINQGAKFRYMFGGKAQVP-ITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFFFEDKTSYNMK-GEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEA 232
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.373e-24 Identity = 61/143 (42.66%), Postives = 81/143 (56.64%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAE 440 F A DQI+N AAK Y SG Q + R P GA HSQ A++ H+PGLKVV+P + AKGLL + IRDPNPV+F E + LY S E DD++LP+ +A + R G D TLV +G ++ +A + E Sbjct: 218 FNFAMQAIDQIINSAAKTLYMSGGQMGAP-IVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEVPKLDDFVLPIGKARIHRTGKDATLVSFGIGMTYAIKAAAELE 359
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.794e-24 Identity = 61/135 (45.19%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 30 AFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLD 434 AF+QI N A RY SG F + +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPV+FFE LY L +E+P D+Y LPL +AE++R+G D+T++ + + QA +D Sbjct: 90 AFNQISNNAGMLRYTSGGNFQIP-IVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYNLK-DELPNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVD 222
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 5.219e-24 Identity = 60/120 (50.00%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 30 AFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 389 AF+QI N A RY SG F L +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+P+++Y LPL++ E +R+G DIT++ Sbjct: 90 AFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPQEEYFLPLNKVEFVRKGKDITIL 207
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + +A + EK Sbjct: 88 FEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_STAAU (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus GN=pdhB PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + +A + EK Sbjct: 88 FEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_STAAS (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=pdhB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + +A + EK Sbjct: 88 FEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK 226 The following BLAST results are available for this feature:
BLAST of CX289237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289237 ID=CX289237; Name=CX289237; organism=Citrus clementina; type=EST; length=443bpback to top |