CX289237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_STAAR (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=pdhB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + +A + EK Sbjct: 88 FEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_STAAN (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain N315) GN=pdhB PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + +A + EK Sbjct: 88 FEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + +A + EK Sbjct: 88 FEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 15 GRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWG 398 G FPA QI AA+ R RS + L VR P G +HS++ EA + + GLK V+P +P KGL L+ I P+PV+FFEPK LYR +E+P D Y +P+ EA +I EGS++T+V +G Sbjct: 87 GFSFPAMFQIFVHAARIRNRSRGVYTAP-LVVRMPMGGGIKALEHHSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYRAFRQEIPSDYYTVPIGEANLISEGSELTIVSYG 213
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.518e-23 Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 + FD++ + A+ R+RSG +T+R P+G H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR EEVPE++Y + + +A V +EG+DITL+ +GA + +A + EK Sbjct: 88 YEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.518e-23 Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 + FD++ + A+ R+RSG +T+R P+G H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR EEVPE++Y + + +A V +EG+DITL+ +GA + +A + EK Sbjct: 88 YEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.518e-23 Identity = 57/140 (40.71%), Postives = 82/140 (58.57%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 F FD I + A+ R+RSG +T+R P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + +A + EK Sbjct: 88 FEVFDAIAGQIARTRFRSGGT-KTAPVTIRGPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK 226
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.983e-23 Identity = 60/134 (44.78%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 413 F AFD IVN AAK Y SG Q C + R P GA HSQ+ A + HVPGLKVV P S KGL+L+ IRD NPV+F E + LY S +VPE +P +A+++REGS +T+V + Q+ + Sbjct: 83 FNFAMQAFDHIVNSAAKTHYMSGGQAKCP-IVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPETIEPIPFGQAKILREGSSVTIVTFSIQVKL 214
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.418e-23 Identity = 59/134 (44.03%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 413 F AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPVVF E + LY S +VP+ +P +A+++REGS +T+V + Q+ + Sbjct: 83 FNFAMQAFDHIVNSAAKTHYMSGGQVKCP-IVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSF-DVPKTIEPIPFGQAKILREGSSVTIVTFSIQVKL 214
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.418e-23 Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 15 GRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWG 398 G FPA QI AA+ R RS + C + VR P G +HS++ EA + + GLK V+P +P KGL L+ + P+PVVFFEPK LYR +E+P D Y +P+ +A +I +G+++T+V +G Sbjct: 88 GFSFPAMFQIFTHAARIRNRSRGVYTCP-IIVRMPMGGGIKALEHHSETLEAIYGQIAGLKTVMPSNPYDTKGLFLAAVESPDPVVFFEPKKLYRAFRQEIPADYYTVPIGQANLISQGNNLTIVSYG 214 The following BLAST results are available for this feature:
BLAST of CX289237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289237 ID=CX289237; Name=CX289237; organism=Citrus clementina; type=EST; length=443bpback to top |