CX289237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODBB_PSEPU (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida GN=bkdA2 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.418e-23 Identity = 62/159 (38.99%), Postives = 91/159 (57.23%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE----------------EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI----MEQACLDAE 440 +PA DQIV+E A+ RYRS +F LT+R P G +GG HSQSPEA F V GL+ V+P +P AKGLL++ I +PV+F EPK LY + VP+ Y +PL +A + R G+D++++ +G + + E++ +DAE Sbjct: 90 YPASDQIVSEMARLRYRSAGEF-IAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVAAEESGVDAE 247
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.770e-23 Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 413 F AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +VP+ +P S+A++++EGS++T+V + Q+ + Sbjct: 83 FNFAMQAFDHIVNSAAKTHYMSGGQVKCP-IVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKL 214
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.770e-23 Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 413 F AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +VP+ +P S+A++++EGS++T+V + Q+ + Sbjct: 83 FNFAMQAFDHIVNSAAKTHYMSGGQVKCP-IVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKL 214
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 5.770e-23 Identity = 57/122 (46.72%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 33 FDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWG 398 FDQI N+AAKFRY G + + +RA GA HSQ F H+PGLKVV P +P KGLL+ IRD +PV+F E K LY L EVPE Y +P EA ++R+G D+++V +G Sbjct: 101 FDQIFNQAAKFRYMFGGKAETP-VVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFCEHKNLYGLE-GEVPEGAYAIPFGEANIVRDGKDVSIVTYG 220
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 9.843e-23 Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 30 AFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 425 AF+QI N A Y SG ++ L +R P G HSQ EA+F VPGLK+V +P AKGLL + IRD NPV+F E LY L +E+P+ +Y+LPL +A+V+REGSD+T++ + L + QA Sbjct: 91 AFNQISNNAGMLHYTSGGNWSIP-LVIRGPGGIGKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYNLK-QEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQA 220
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.203e-20 Identity = 55/129 (42.64%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 9 GFGRGFP--AFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 389 G GF AF+QI N A Y SG F L VR P G G HSQ E++F VPGL++V +P AKGL+ S IR NP++FFE LY + E +P+ +Y++PL +AE++R G+ IT++ Sbjct: 81 GMNMGFLLLAFNQIANNAGMLHYTSGGNFTTP-LVVRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYNIK-ENIPQKEYLVPLEKAELVRSGNQITIL 207
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.203e-20 Identity = 56/129 (43.41%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLV 389 F A D I+N AAK Y S Q N + R P GA G HSQ A++ VPGLKV+ P S A+GLL + IRDP+PVVF E + LY S EE + + LP+ +A++ REG D+T+V Sbjct: 116 FNFSMQAIDHIINSAAKSNYMSAGQINVP-IVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIV 243
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.501e-20 Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 413 F A D IVN AAK Y SG Q C + R P GA HSQ+ A + ++PGLKVV P S KGL+++ IRD NPV+F E + LY S ++ E+ +P +A+V++EG +T+V + Q+ + Sbjct: 83 FNFAMQAMDHIVNSAAKTHYMSGGQVRCP-IVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSF-DISENVEPIPFGKAKVLKEGDSVTIVTFSIQVKL 214
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 5.971e-20 Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 30 AFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLS 410 A D I+N AAK Y SG Q C + R P GA G H+Q+ ++ VPGL V+ P AKGLL + IR +PVVF E + LY + + DD++LP+ +A +IREG D+T+V + +S Sbjct: 225 AIDHIINSAAKTHYMSGGQVRCP-IVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFDVPKMDDFVLPIGKARIIREGKDVTIVSYSIGVS 350
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 5.971e-20 Identity = 59/147 (40.14%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLVGW--GAQLSIMEQACLDA 437 F A DQI+N AAK Y S + + R P GA HSQ A++ H PGLKVV P S AKGLL + IRD NPVVF E + LY S +EV DD+++P+ +A++ R G +T+V + G + S+ L+A Sbjct: 105 FNFSMQAIDQIINSAAKTYYMSAGRVPVP-IVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSRGVEFSLEAAKQLEA 250 The following BLAST results are available for this feature:
BLAST of CX289237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289237 ID=CX289237; Name=CX289237; organism=Citrus clementina; type=EST; length=443bpback to top |