CX289237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_CYACA (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium caldarium GN=pdhB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.774e-17 Identity = 53/129 (41.09%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 9 GFGRGFP--AFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 389 G GF AF+QI N + +Y SG FN + +R P G HSQ E+ F +PGL++V + AKGLL S I + P++F E LY L VP+++Y LPL +AEV+R GSD+T+V Sbjct: 81 GMNMGFMLLAFNQISNNLSMLQYTSGGNFNIP-VVIRGPGGIGKQLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSAIIEKKPILFLEHVLLYNLK-GFVPDEEYYLPLDKAEVVRSGSDVTIV 207
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.731e-17 Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLVG 392 F A D IVN AA+ Y SG C + R P G HSQ ++ +PGLKVV P S A+GLL + IRDPNPVV E + LY + +E +D++LP A+V R G DIT+VG Sbjct: 118 FNFSMQAIDHIVNSAARTLYMSGGIQACP-IVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLENEILYGKTFPISKEALSEDFVLPFGLAKVERPGKDITIVG 246
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.179e-17 Identity = 52/147 (35.37%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 443 F A D I+N AAK Y S Q + + R G G HS +++ PGLKV++P S A+GLL + IRDP+PVVF E + LY S EV + + LP+ +A++ REG D+T+ + + +A EK Sbjct: 106 FNFSMQAIDHIINSAAKSNYMSAGQISVP-IVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKDVTITAFSKMVGFALKAAEILEK 251
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 8.070e-17 Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE---EVPEDDYMLPLSEAEVIREGSDITLV 389 F A DQ++N AAK Y S + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y ++ E E D+++P+ +A++ R+G+ IT+V Sbjct: 113 FNFSMQAIDQVINSAAKTYYMSAG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVV 240
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.054e-16 Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 12 FGRGFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE---EVPEDDYMLPLSEAEVIREGSDITLV 389 F A DQ++N AAK Y S + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y ++ E E D+++P+ +A++ R+G+ IT+V Sbjct: 113 FNFSMQAIDQVINSAAKTYYMSAG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGVAFELPAEAQSKDFLIPIGKAKIERQGTHITVV 240
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.054e-16 Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = 3 Query: 36 DQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPE---DDYMLPLSEAEVIREGSDITLV 389 D I+N AAK Y S +F+ + R GA HSQ A+F H PG+KVV+P A+GLL + +RD NPV+ E + LY + PE D++LP +A++ R G DIT+V Sbjct: 122 DHIINSAAKAHYMSAGRFHVP-IVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIV 241
BLAST of CX289237 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.798e-16 Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 24 FPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGG--HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 425 FP FDQI + AK R + + +R P+G GH G +H ++PEA+F H GL++V P +P A ++ I +PV+FFEP Y EV + LPL + ++R G+D T+V W + + +A Sbjct: 101 FPGFDQITTQLAKMANRHSGAVSMP-VVIRIPHG--GHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRY-WPKGEVDTLENPLPLHASRIVRSGTDATIVAWAGMVPVALRA 232 The following BLAST results are available for this feature:
BLAST of CX289237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289237 ID=CX289237; Name=CX289237; organism=Citrus clementina; type=EST; length=443bpback to top |