CX289241

Overview
NameCX289241
Unique NameCX289241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL90_ARATH (GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana GN=At5g42160/At5g42170 PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.171e-22
Identity = 51/139 (36.69%), Postives = 79/139 (56.83%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +++Y+V A S D    Y A+   +  Y    Y+  L  S S F+  LYGLGAR+ GV S  P+GC PAAR L G   R C  ++N  A+ FN K++ +   L K+LP  ++V+ D+   L +++++P  +GF  + R C
Sbjct:  179 NSLYLVVASSNDIAHTYTAR---SIKYNKTSYADYLADSASKFVSALYGLGARRIGVFSAVPVGCVPAARTLRGKLKRRCSEKLNEVARNFNAKISPTLEALGKELPDSRVVLIDVCDTLNDMIENPKNYGFEVSNRGC 314          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.223e-21
Identity = 46/139 (33.09%), Postives = 81/139 (58.27%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +++++V  GS D   +++  P +   YT   +++++  +  SF + LYG GAR+  V   PP+GC P+ R + G   R CV+R N AA+ FN K++++   L + L    I+  DI+ PL +L+ +P ++GF  A + C
Sbjct:  182 NSLFVVICGSNDIANDFFTLPPVRLHYTVASFTALMADNARSFAQTLYGYGARRILVFGAPPIGCVPSQRTVAGGPTRDCVARFNDAAKLFNTKLSANIDVLSRTLQDPTIIYIDIYSPLLDLILNPHQYGFKVANKGC 320          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 7.928e-21
Identity = 49/135 (36.30%), Postives = 71/135 (52.59%), Query Frame = 2
Query:   14 IVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            IV AGS D    YY +     +Y  + Y+S +  S +SF   LY  GA+K G   + P+GC P  R   G   R C   +N AAQ FN K+++S + L K +    +V  DI+    +++Q+P K+GF E  R C
Sbjct:  211 IVVAGSDDLANTYYGEHLEEFLYDIDTYTSFMASSAASFAMQLYESGAKKIGFIGVSPIGCIPIQRTTRGGLKRKCADELNFAAQLFNSKLSTSLNELAKTMKNTTLVYIDIYSSFNDMIQNPKKYGFDEIDRGC 345          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL43_ARATH (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.035e-20
Identity = 50/141 (35.46%), Postives = 75/141 (53.19%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYT-PEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARIL-FGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A  +V AG  DF+ NYY  PS    Y     Y   ++K   +F++ LY LG R   V  LPP+GC P      F N  R C+   N  +  +N+K+ +    ++  LPG K +  D++ P+ E++Q+PSK+GF E  R C
Sbjct:  165 NAFVVVSAGPNDFILNYYEIPSRRLEYPFISGYQDFILKRLENFVRELYSLGVRNVLVGGLPPMGCLPIHMTAKFRNIFRFCLEHHNKDSVLYNEKLQNLLPQIEASLPGSKFLYADVYNPMMEMIQNPSKYGFKETKRGC 305          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.352e-20
Identity = 49/144 (34.03%), Postives = 75/144 (52.08%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNH---GRGCVSRINIAAQQFNKKVNSSASNLQKQLP--GLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A++ V AG+ DF+ NY+  P   K +T E Y   ++ +   FI+ L+  GARK  V  LPP+GC P    LF       R C+ R +  A  +N  +    + +Q  L   G KI   D++ P++E+++ P KFGF E    C
Sbjct:  176 EAMFCVSAGTNDFVINYFTIPIRRKTFTIEAYQQFVISNLKQFIQGLWKEGARKITVAGLPPIGCLPIVITLFSGEALTNRRCIDRFSTVATNYNFLLQKQLALMQVGLAHLGSKIFYLDVYNPVYEVIRDPRKFGFEEVFSGC 319          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 1.766e-20
Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYT-PEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARIL-FGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A  +V AG  DF+ NYY  PS    Y     Y   ++K   +F++ LY LG R   V  LPP+GC P      F N  R C+   N  +  +N+K+      ++  LPG K +  D++ P+ E++Q+PSK+GF E  R C
Sbjct:  165 NAFVVVSAGPNDFILNYYDIPSRRLEYPFISGYQDFILKRLENFVRELYSLGVRNVLVGGLPPMGCLPIHMTAKFRNIFRFCLEHHNKDSVLYNEKLQKLLPQIEASLPGSKFLYADVYNPMMEMIQNPSKYGFKETKRGC 305          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL52_ARATH (GDSL esterase/lipase At3g14820 OS=Arabidopsis thaliana GN=At3g14820 PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 3.935e-20
Identity = 47/138 (34.06%), Postives = 80/138 (57.97%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            ++++V + S D  + Y+ +   +  Y    Y+  LV+  S FIK L  LGA+  G+ S  P+GC PA R LFG   R C  ++N  A  FN K++SS   L+K+LP  +++  D++  L +++++P+ +GF  A + C
Sbjct:  162 SVFLVVSSSNDLAETYWVR---SVEYDRNSYAEYLVELASEFIKELSELGAKNIGLFSGVPVGCLPAQRTLFGGFERKCYEKLNNMALHFNSKLSSSLDTLKKELPS-RLIFIDVYDTLLDIIKNPTNYGFKVADKGC 295          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.139e-20
Identity = 43/139 (30.94%), Postives = 74/139 (53.24%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +++Y++  G+ DFL+NYY  P   + Y+  +Y   L+   + F+ ++Y LGARK  ++ L P GC P  R     +G  C+   NI A+ FN K+      L + L G+++V  + +  + E++  P  FGF     +C
Sbjct:  158 ESLYLISIGTNDFLENYYLLPRKLRKYSVNEYQYFLIGIAADFVTDIYRLGARKMSLSGLSPFGCLPLERTTQLFYGSKCIEEYNIVARDFNIKMEEKVFQLNRDLNGIQLVFSNPYDLVSEIIYHPEAFGFENVRSAC 296          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 5.139e-20
Identity = 47/141 (33.33%), Postives = 78/141 (55.32%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFP--AARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A+ IV +G+ DF  N Y  PS  +    + Y S ++ +  +F++ LY +G RK  V  LPP+GC P      +   + R C+ + N  +Q+FN+K+ +S + +Q  L G  I   DI+  LF++  +P ++G  E TR C
Sbjct:  166 EALVIVSSGTNDFNLNLYDTPSRRQKLGVDGYQSFILSNVHNFVQELYDIGCRKIMVLGLPPVGCLPIQMTMAMQKQNERRCIDKQNSDSQEFNQKLKNSLTEMQSNLTGSVIFYGDIYGALFDMATNPQRYGLKETTRGC 306          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL85_ARATH (GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.712e-20
Identity = 52/139 (37.41%), Postives = 78/139 (56.12%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +AI+++  GS DFLQNY    +  K +T EQY   L        K L+ LGA++  V  +PP+GC P  + L G   + CV ++N  A  FN K+  +   LQ ++ GLK +  D +  + E +++P KFGFVEA+  C
Sbjct:  168 NAIFLMSMGSNDFLQNYLVDFTRQKQFTVEQYIEFLSHRMLYDAKMLHRLGAKRLVVVGVPPMGCMPLIKYLRGQ--KTCVDQLNQIAFSFNAKIIKNLELLQSKI-GLKTIYVDAYSTIQEAIKNPRKFGFVEASLGC 303          
The following BLAST results are available for this feature:
BLAST of CX289241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
GDL90_ARATH7.171e-2236.69GDSL esterase/lipase At5g42170 OS=Arabidopsis thal... [more]
EXL1_ARATH1.223e-2133.09GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]
GDL4_ARATH7.928e-2136.30GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL43_ARATH1.035e-2035.46GDSL esterase/lipase At2g31540 OS=Arabidopsis thal... [more]
GDL86_ARATH1.352e-2034.03GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]
GDL44_ARATH1.766e-2035.46GDSL esterase/lipase At2g31550 OS=Arabidopsis thal... [more]
GDL52_ARATH3.935e-2034.06GDSL esterase/lipase At3g14820 OS=Arabidopsis thal... [more]
GDL66_ARATH5.139e-2030.94GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GDL1_ARATH5.139e-2033.33GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]
GDL85_ARATH6.712e-2037.41GDSL esterase/lipase At5g45950 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02010G07SK IF1 Citrus clementina cDNA clone C02010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289241 ID=CX289241; Name=CX289241; organism=Citrus clementina; type=EST; length=418bp
GGATGCAATATACATAGTGGGTGCTGGGAGTGGTGACTTTCTTCAGAATT
ACTATGCCAAACCATCGCTTAACAAAGTCTATACTCCTGAACAGTATAGC
TCAATGCTTGTCAAATCTTTCTCAAGTTTTATCAAGAATTTGTATGGATT
GGGAGCAAGGAAATTTGGAGTCACTTCATTGCCACCGCTGGGTTGCTTTC
CCGCAGCAAGAATTTTATTCGGTAATCATGGAAGGGGCTGTGTCTCTAGA
ATCAATATTGCTGCTCAACAATTTAATAAGAAGGTCAACTCTTCAGCATC
AAATCTCCAAAAGCAACTTCCTGGTCTGAAAATTGTGATTTTCGACATTT
TCAAGCCACTCTTTGAACTTGTCCAGTCCCCTTCAAAATTTGGCTTCGTG
GAAGCAACAAGAAGTTGC
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