CX289241

Overview
NameCX289241
Unique NameCX289241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL30_ARATH (GDSL esterase/lipase At1g73610 OS=Arabidopsis thaliana GN=At1g73610 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.712e-20
Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A+Y++ AG+ D    Y+   +    YT   Y+  LV      IK+LY +GARKF V    PLGC P AR L     R C   +N  A  FN+++++   NL    PG K V  D++ PL  L+ +P   GF++   +C
Sbjct:  165 NAVYLISAGNNDIAITYFTTGARRLQYTLPAYNDQLVSWTRDLIKSLYDMGARKFAVMGTLPLGCLPGARAL----TRACELFVNQGAAMFNQQLSADIDNLGATFPGAKFVYVDMYNPLLGLIINPQASGFIDVADAC 299          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL15_ARATH (GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.495e-19
Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 2
Query:    8 IYIVGAGSGDFLQNYYAKP--SLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            IY VG GS D+L NY+     S ++ +TPEQY++ L+  +S+ +  LY  GARKF ++ +  +GC P A +     GR CV RIN A Q FN K+ S    L    P  K +  + +    +++ +P++FGF      C
Sbjct:  161 IYSVGLGSNDYLNNYFMPTFYSSSRQFTPEQYANDLISRYSTQLNALYNYGARKFALSGIGAVGCSPNA-LAGSPDGRTCVDRINSANQIFNNKLRSLVDQLNNNHPDAKFIYINAYGIFQDMITNPARFGFRVTNAGC 298          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.331e-19
Identity = 47/137 (34.31%), Postives = 78/137 (56.93%), Query Frame = 2
Query:   17 VGAGSGDFLQNYYA--KPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAA-RILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +  GS D++ NY    + S ++ Y+ E Y+ +L+K+ S+ I  LY LGARK  +    PLGC P+   ++ GN+  GCV++IN     FN ++   A+ L   LPG   V  ++F    ++V +PS++G V +  +C
Sbjct:  164 INIGSNDYINNYLMPERYSTSQTYSGEDYADLLIKTLSAQISRLYNLGARKMVLAGSGPLGCIPSQLSMVTGNNTSGCVTKINNMVSMFNSRLKDLANTLNTTLPGSFFVYQNVFDLFHDMVVNPSRYGLVVSNEAC 300          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL39_ARATH (GDSL esterase/lipase At2g24560 OS=Arabidopsis thaliana GN=At2g24560 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.350e-19
Identity = 46/141 (32.62%), Postives = 78/141 (55.32%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTP-EQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARIL-FGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A+ ++ AG  DF+ NYY  PS    +     Y   +++   +F++ LY LG RK  V  LPP+GC P      F N  R C+ + N  +  +N+K+ +    ++  L G KI+  +++ P+ +++Q+PSK+GF E  R C
Sbjct:  164 NALVVISAGPNDFILNYYDIPSRRLEFPHISGYQDFVLQRLDNFVRELYSLGCRKIMVGGLPPMGCLPIQMTAKFRNALRFCLEQENRDSVLYNQKLQNLLPQIEASLTGSKILYSNVYDPMMDMMQNPSKYGFKETKRGC 304          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.682e-19
Identity = 43/139 (30.94%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +++YIV  G+ DFL+NYY  P     ++  QY   LV+    F+K++Y LGARK   T + P+GC P  R+   +    C    N  A  FN ++    + L ++L G+KI   + +  ++++V  P+ +G   ++ +C
Sbjct:  157 ESLYIVSIGTNDFLENYYTLPDRRSQFSISQYQDFLVEIAEVFLKDIYRLGARKMSFTGISPMGCLPLERVTNLDDPFSCARSYNDLAVDFNGRLRRLVTKLNRELTGIKIYFANPYDIMWDIVTKPNLYGLEISSSAC 295          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.421e-19
Identity = 46/141 (32.62%), Postives = 74/141 (52.48%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVY-TPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARIL-FGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A+ ++ AG  DF+ N+Y  P+    Y T   Y   ++K    F++ LY LG R   V  LPP+GC P        N  R CV + N  +  +N+K+      +Q  LPG   +  +++ PL +++Q+PSK+GF E  + C
Sbjct:  164 NALVVISAGPNDFILNFYDIPTRRLEYPTIHGYQEFILKRLDGFVRELYSLGCRNIVVGGLPPMGCLPIQMTAKMRNILRFCVEQENKDSVLYNQKLVKKLPEIQASLPGSNFLYANVYDPLMDMIQNPSKYGFKETKKGC 304          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18
Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            A+Y++  GS D+   +    SL    +  Q+  +++ + ++FI  +Y +G RKFG  ++P LGCFPA RIL   +   C+   +  A   N+ + +    +Q+Q+ G K  +FD+ K L   +Q PSKFGF E   +C
Sbjct:  176 AVYLISIGSNDYSSIFLTNQSLP--ISMSQHVDIVIGNLTTFIHEIYKIGGRKFGFLNVPDLGCFPALRILQPKNDDSCLRDASRLASMHNRALTNLLFQMQRQVKGFKFSLFDMNKSLRLRMQHPSKFGFKEGEEAC 311          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18
Identity = 49/139 (35.25%), Postives = 78/139 (56.12%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGN-HGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            + ++V + S D    Y A+      Y    Y++ L  S   F++ L+ LGARK GV S  P+GC P  R +FG    RGC   +N  A+QFN +++ +  +L K+L G+ I+  +++  LF+++Q P K+GF  A R C
Sbjct:  160 SFFLVVSSSNDLAHTYLAQTHR---YDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKELDGV-ILYINVYDTLFDMIQHPKKYGFEVADRGC 294          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18
Identity = 49/139 (35.25%), Postives = 78/139 (56.12%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGN-HGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            + ++V + S D    Y A+      Y    Y++ L  S   F++ L+ LGARK GV S  P+GC P  R +FG    RGC   +N  A+QFN +++ +  +L K+L G+ I+  +++  LF+++Q P K+GF  A R C
Sbjct:  160 SFFLVVSSSNDLAHTYLAQTHR---YDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKELDGV-ILYINVYDTLFDMIQHPKKYGFEVADRGC 294          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: EXL2_ARATH (GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 41/139 (29.50%), Postives = 75/139 (53.96%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +++++V  GS D    Y+  PS+ + Y    +++++  +  SF + L+  GAR+  V   PP+GC P+ R L G   R CV R N A + +N K+ ++  +L + L    I+  DI+  L +++  P ++GF    + C
Sbjct:  190 NSLFMVICGSNDITNTYFGLPSVQQQYDVASFTTLMADNARSFAQKLHEYGARRIQVFGAPPVGCVPSQRTLAGGPTRNCVVRFNDATKLYNVKLAANLGSLSRTLGDKTIIYVDIYDSLLDIILDPRQYGFKVVDKGC 328          
The following BLAST results are available for this feature:
BLAST of CX289241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
GDL30_ARATH6.712e-2035.25GDSL esterase/lipase At1g73610 OS=Arabidopsis thal... [more]
GDL15_ARATH1.495e-1935.97GDSL esterase/lipase At1g29670 OS=Arabidopsis thal... [more]
GLIP7_ARATH3.331e-1934.31GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
GDL39_ARATH4.350e-1932.62GDSL esterase/lipase At2g24560 OS=Arabidopsis thal... [more]
GDL48_ARATH5.682e-1930.94GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL42_ARATH7.421e-1932.62GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
GLIP5_ARATH2.159e-1833.33GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
GDL26_ARATH2.159e-1835.25GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH2.159e-1835.25GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]
EXL2_ARATH6.282e-1829.50GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02010G07SK IF1 Citrus clementina cDNA clone C02010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289241 ID=CX289241; Name=CX289241; organism=Citrus clementina; type=EST; length=418bp
GGATGCAATATACATAGTGGGTGCTGGGAGTGGTGACTTTCTTCAGAATT
ACTATGCCAAACCATCGCTTAACAAAGTCTATACTCCTGAACAGTATAGC
TCAATGCTTGTCAAATCTTTCTCAAGTTTTATCAAGAATTTGTATGGATT
GGGAGCAAGGAAATTTGGAGTCACTTCATTGCCACCGCTGGGTTGCTTTC
CCGCAGCAAGAATTTTATTCGGTAATCATGGAAGGGGCTGTGTCTCTAGA
ATCAATATTGCTGCTCAACAATTTAATAAGAAGGTCAACTCTTCAGCATC
AAATCTCCAAAAGCAACTTCCTGGTCTGAAAATTGTGATTTTCGACATTT
TCAAGCCACTCTTTGAACTTGTCCAGTCCCCTTCAAAATTTGGCTTCGTG
GAAGCAACAAGAAGTTGC
back to top