CX289241

Overview
NameCX289241
Unique NameCX289241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 47/135 (34.81%), Postives = 72/135 (53.33%), Query Frame = 2
Query:   14 IVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            IV AGS D +  Y+   + +     + +++M+  S +SF+  LYG GAR+ GV   PP+GC P+ R+      + C   +N AAQ FN K+      L K LP   IV  DI+    ++++SP  +GF E  + C
Sbjct:  264 IVVAGSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASFVLQLYGYGARRIGVIGTPPIGCTPSQRV---KKKKICNEDLNYAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPC 395          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17
Identity = 44/137 (32.12%), Postives = 72/137 (52.55%), Query Frame = 2
Query:    8 IYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            + IV  GS D +  Y+   +       + Y++++  S +SF+  LYG GAR+ GV   PPLGC P+ R+      + C   +N A+Q FN K+      L K LP    V  DI+  + +++++P+ +GF E  + C
Sbjct:  345 VAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTIIADSAASFVLQLYGYGARRIGVIGTPPLGCVPSQRL---KKKKICNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPC 478          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL80_ARATH (GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 45/141 (31.91%), Postives = 78/141 (55.32%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSL--NKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            DA+Y +G GS D++ N+  +P +   + YT +++  +L  +  + +  +Y LGARK     L PLGC P+ R+   +  R C++R+N    +FN +      +L K+LPG K    D +  + +L+ +P+ +GF  A  SC
Sbjct:  157 DAMYFIGLGSNDYVNNFL-QPFMADGQQYTHDEFVELLTSTLHNQLTTIYKLGARKVIFHGLGPLGCIPSQRVK--SKTRMCLNRVNEWVLEFNSRTKKLLIDLNKRLPGAKFSFADTYPAVLDLINNPTHYGFKIANTSC 294          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 2
Query:    8 IYIVGAGSGDFLQNYYAKP--SLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            IY VG GS D+L NY+     S ++ YTPEQY+  L+  +   +  LY  GARKF +  +  +GC P A       G  CV RIN A + FN ++ S    L            + +    +++ +PS +GF     +C
Sbjct:  161 IYSVGMGSNDYLNNYFMPQFYSTSRQYTPEQYADDLISRYRDQLNALYNYGARKFALVGIGAIGCSPNALAQGSQDGTTCVERINSANRIFNNRLISMVQQLNNAHSDASFTYINAYGAFQDIIANPSAYGFTNTNTAC 299          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: EXL6_ARATH (GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana GN=EXL6 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 45/141 (31.91%), Postives = 76/141 (53.90%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASN--LQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A++++  G+ D    Y+  P+L ++ +   Y+S +V     F+K+LY LGARKF V  + P+GC P  R  FG     C   +N   + FN K+    ++  ++      K V  DI+  L +LV++P  +GF EA ++C
Sbjct:  160 NAVFLISEGNNDL--GYFVAPALLRLQSTTTYTSKMVVWTRKFLKDLYDLGARKFAVMGVMPVGCLPIHRASFGGVFGWCNFLLNRITEDFNMKLQKGLTSYAVEYDFKDAKFVYVDIYGTLMDLVKNPMAYGFTEAKKAC 298          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL41_ARATH (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana GN=At2g30220 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.318e-17
Identity = 45/145 (31.03%), Postives = 75/145 (51.72%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVY-TPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAA-----RILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A+ ++ AG  DF+ N+Y  P     Y T   Y   ++K    F++ LY LG R   V  LPP+GC P       R + G     CV + N  +  +N+K+      +Q  LPG K +  +++ P+ +++++PSK+GF E  + C
Sbjct:  163 NALVVISAGPNDFILNFYDIPIRRLEYPTIYGYQDFVLKRLDGFVRELYSLGCRNILVGGLPPMGCLPIQLTAKLRTILGI----CVEQENKDSILYNQKLVKKLPEIQASLPGSKFLYANVYDPVMDMIRNPSKYGFKETKKGC 303          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL55_ARATH (GDSL esterase/lipase At3g43550 OS=Arabidopsis thaliana GN=At3g43550 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16
Identity = 45/131 (34.35%), Postives = 74/131 (56.49%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGN-HGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFG 394
            + ++V + S D    Y A+      Y    Y++ L  S   F++ L+ LGARK GV S  P+GC P  R +FG    RGC   +N  A+QFN +++ +  +L K+L G+ I+  +++  LF+++Q P K+G
Sbjct:  160 SFFLVVSSSNDLAHTYLAQAHR---YDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKELDGV-IIYINVYDTLFDMIQHPKKYG 286          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL24_ARATH (GDSL esterase/lipase At1g58480 OS=Arabidopsis thaliana GN=At1g58480 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.447e-16
Identity = 45/131 (34.35%), Postives = 74/131 (56.49%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGN-HGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFG 394
            + ++V + S D    Y A+      Y    Y++ L  S   F++ L+ LGARK GV S  P+GC P  R +FG    RGC   +N  A+QFN +++ +  +L K+L G+ I+  +++  LF+++Q P K+G
Sbjct:  160 SFFLVVSSSNDLAHTYLAQAHR---YDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNEPLNNMAKQFNARLSPALDSLDKELDGV-ILYINVYDTLFDMIQHPKKYG 286          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLN----KVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            AI+ V  GS D + NY+  P ++    KV  PE +   ++  F   +  LY LGARK  V ++ P+GC P  R      G  C++  N  AQ +N K+ +    L K L G + V  D+F+ + +++Q+ S +GF      C
Sbjct:  159 AIFSVTTGSNDLINNYFT-PVISTLQRKVVAPEVFVDTMISKFRLQLTRLYQLGARKIVVINIGPIGCIPFERESDPAAGNNCLAEPNEVAQMYNLKLKTLVEELNKNLQGSRFVYGDVFRIVDDIIQNYSSYGFESEKIPC 299          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 41/145 (28.28%), Postives = 71/145 (48.97%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGN------HGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A++++ AG+ D + N Y    L  + +   Y   L+     F++ LY  GAR+  +  LPP+GC P    L         H R C    N  ++ +N+K+      L ++  G K++  DI+ PL ++++ P K+G  E  R C
Sbjct:  165 NAVFVISAGTNDMIFNVYDHV-LGSLISVSDYQDSLLTKVEVFVQRLYEAGARRITIAGLPPIGCLPVQVTLTSINTPRIFHHRICTEHQNDDSRVYNQKLQKLIFGLSQRFRGSKVLYLDIYSPLIDMIKHPRKYGLEETLRGC 308          
The following BLAST results are available for this feature:
BLAST of CX289241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
APG_BRANA6.282e-1834.81Anther-specific proline-rich protein APG (Fragment... [more]
APG_ARATH3.118e-1732.12Anter-specific proline-rich protein APG OS=Arabido... [more]
GDL80_ARATH4.072e-1731.91GDSL esterase/lipase At5g37690 OS=Arabidopsis thal... [more]
GDL14_ARATH4.072e-1732.37GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
EXL6_ARATH4.072e-1731.91GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana ... [more]
GDL41_ARATH5.318e-1731.03GDSL esterase/lipase At2g30220 OS=Arabidopsis thal... [more]
GDL55_ARATH2.021e-1634.35GDSL esterase/lipase At3g43550 OS=Arabidopsis thal... [more]
GDL24_ARATH3.447e-1634.35GDSL esterase/lipase At1g58480 OS=Arabidopsis thal... [more]
GDL64_ARATH1.003e-1532.39GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GDL47_ARATH1.003e-1528.28GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02010G07SK IF1 Citrus clementina cDNA clone C02010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289241 ID=CX289241; Name=CX289241; organism=Citrus clementina; type=EST; length=418bp
GGATGCAATATACATAGTGGGTGCTGGGAGTGGTGACTTTCTTCAGAATT
ACTATGCCAAACCATCGCTTAACAAAGTCTATACTCCTGAACAGTATAGC
TCAATGCTTGTCAAATCTTTCTCAAGTTTTATCAAGAATTTGTATGGATT
GGGAGCAAGGAAATTTGGAGTCACTTCATTGCCACCGCTGGGTTGCTTTC
CCGCAGCAAGAATTTTATTCGGTAATCATGGAAGGGGCTGTGTCTCTAGA
ATCAATATTGCTGCTCAACAATTTAATAAGAAGGTCAACTCTTCAGCATC
AAATCTCCAAAAGCAACTTCCTGGTCTGAAAATTGTGATTTTCGACATTT
TCAAGCCACTCTTTGAACTTGTCCAGTCCCCTTCAAAATTTGGCTTCGTG
GAAGCAACAAGAAGTTGC
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