CX289244

Overview
NameCX289244
Unique NameCX289244
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length378
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_CHAGB (Autophagy-related protein 8 OS=Chaetomium globosum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.069e-15
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFVD VLPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_ASPTN (Autophagy-related protein 8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg8 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.069e-15
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFVD VLPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_ASPOR (Autophagy-related protein 8 OS=Aspergillus oryzae GN=atg8 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.069e-15
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFVD VLPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_ASPNC (Autophagy-related protein 8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg8 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.069e-15
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFVD VLPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_ASPFU (Autophagy-related protein 8 OS=Aspergillus fumigatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.069e-15
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFVD VLPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_ASPCL (Autophagy-related protein 8 OS=Aspergillus clavatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.069e-15
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFVD VLPPT A+MS IY+E KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.621e-15
Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            +AIFIFVD+VLPPT A+MS IY+E KDEDGFLYVTYSGENTFG
Sbjct:   74 RAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_COCIM (Autophagy-related protein 8 OS=Coccidioides immitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.129e-14
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFVD VLPPT A+MS IY+E KD+DGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDDDGFLYITYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_SCLS1 (Autophagy-related protein 8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg8 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.475e-14
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFVD VLPPT A+MS IY+E KDEDGFLY++YSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_BOTFB (Autophagy-related protein 8 OS=Botryotinia fuckeliana (strain B05.10) GN=atg8 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.475e-14
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFVD VLPPT A+MS IY+E KDEDGFLY++YSGENTFG
Sbjct:   74 KAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of CX289244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
ATG8_CHAGB5.069e-1583.72Autophagy-related protein 8 OS=Chaetomium globosum... [more]
ATG8_ASPTN5.069e-1583.72Autophagy-related protein 8 OS=Aspergillus terreus... [more]
ATG8_ASPOR5.069e-1583.72Autophagy-related protein 8 OS=Aspergillus oryzae ... [more]
ATG8_ASPNC5.069e-1583.72Autophagy-related protein 8 OS=Aspergillus niger (... [more]
ATG8_ASPFU5.069e-1583.72Autophagy-related protein 8 OS=Aspergillus fumigat... [more]
ATG8_ASPCL5.069e-1583.72Autophagy-related protein 8 OS=Aspergillus clavatu... [more]
ATG8_YARLI6.621e-1583.72Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8_COCIM1.129e-1481.40Autophagy-related protein 8 OS=Coccidioides immiti... [more]
ATG8_SCLS11.475e-1481.40Autophagy-related protein 8 OS=Sclerotinia sclerot... [more]
ATG8_BOTFB1.475e-1481.40Autophagy-related protein 8 OS=Botryotinia fuckeli... [more]

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Properties
Property NameValue
Genbank descriptionC02010G10SK IF1 Citrus clementina cDNA clone C02010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289244 ID=CX289244; Name=CX289244; organism=Citrus clementina; type=EST; length=378bp
CCCCCCTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTCCC
ATCGAATTTAAATTATTCGCAATCATCAGTCTGATACCACATAGTTTGAA
CCGGCTTTATCCAAGCATAAAAGGTCATGTAAATAAAAAGCCGGTTTATG
ACCGGCACAAAGCCAGAAAACAGAAACCCTAAATTCAAGATGGGTAGATT
AACAAACGAAACGTTGGTAGAGGAAAAAGGGTAGCGGCAGATTATGCTAT
CCAAATGTGTTTTCACCACTGTAAGTAACATAGAGAAACCCATCTTCATC
CTTTTTTTCATCATATATGGGAGACATTATTGCTCCTGTAGGCGGGAGAA
CATTGTCCACAAATATAAAGATTGCCTT
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