CX289244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.475e-14 Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIF+FV N LPPT A+MS IYDE KDEDGFLY+TYSGENTFG Sbjct: 75 KAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.516e-14 Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIFIF++NVLPPT A+MS IY+E+KD DGFLY+TYSGENTFG Sbjct: 73 KAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.516e-14 Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIFIFV N+LPPT AIMS IY+E KDEDGFLY++YSGENTFG Sbjct: 75 KAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.516e-14 Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG Sbjct: 75 KAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.516e-14 Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG Sbjct: 75 KAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.516e-14 Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG Sbjct: 75 KAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.516e-14 Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIFIFV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG Sbjct: 75 KAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_PICPA (Autophagy-related protein 8 OS=Pichia pastoris GN=ATG8 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.286e-14 Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIFIF+D++LPPT A+MS +Y+E KDEDGFLYV YSGENTFG Sbjct: 74 KAIFIFIDDILPPTAALMSKVYEEHKDEDGFLYVLYSGENTFG 116
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_SCHPO (Autophagy-related protein 8 OS=Schizosaccharomyces pombe GN=atg8 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.291e-14 Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIFIF+D +LPPT A+MS IY+E K EDGFLY+TYSGENTFG Sbjct: 74 KAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTFG 116
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.291e-14 Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = -1 Query: 250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378 KAIF+FV N LPPT A+MS IY+E KDEDGFLY+TYSGENTFG Sbjct: 75 KAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117 The following BLAST results are available for this feature:
BLAST of CX289244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289244 ID=CX289244; Name=CX289244; organism=Citrus clementina; type=EST; length=378bpback to top |