CX289244

Overview
NameCX289244
Unique NameCX289244
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length378
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_PICST (Autophagy-related protein 8 OS=Pichia stipitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.130e-13
Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFV+++LPPT A++S IY+E KDEDGFLYV YSGENTFG
Sbjct:   74 KAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_CANAL (Autophagy-related protein 8 OS=Candida albicans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.130e-13
Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFV+++LPPT A++S IY+E KDEDGFLYV YSGENTFG
Sbjct:   74 KAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_LODEL (Autophagy-related protein 8 OS=Lodderomyces elongisporus GN=ATG8 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.782e-13
Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = -1
Query:  241 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG*HN 378
            KAIFIFV+++LPPT A++S IY+E KD+DGFLYV YSGENTFG  N
Sbjct:   74 KAIFIFVNDILPPTAALISTIYEEHKDDDGFLYVLYSGENTFGEQN 119          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.745e-13
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFV + LPPT A+MS IY+  KDEDGFLY+TYSGENTFG
Sbjct:   74 KAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.745e-13
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFV++ LPPT ++MS +Y E KD+DGFLYVTYSGENTFG
Sbjct:   74 KAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13
Identity = 31/43 (72.09%), Postives = 39/43 (90.70%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFV+++LPPT ++MS IY++ KDEDGFLY+ YSGENTFG
Sbjct:   74 KAIFIFVNDILPPTASLMSTIYEQYKDEDGFLYILYSGENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_DICDI (Autophagy-related protein 8 OS=Dictyostelium discoideum GN=atg8 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.057e-12
Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAI++FV+N +PPT A++S IY+  KDEDGFLY+TYSGENTFG
Sbjct:   77 KAIYLFVNNTIPPTAALISQIYERYKDEDGFLYITYSGENTFG 119          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.246e-12
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFV++ LPPT A+MS IY + KD+DGFLYV+YS ENTFG
Sbjct:   74 KAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTFG 116          
BLAST of CX289244 vs. ExPASy Swiss-Prot
Match: ATG8_ASHGO (Autophagy-related protein 8 OS=Ashbya gossypii GN=ATG8 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.246e-12
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = -1
Query:  250 KAIFIFVDNVLPPTGAIMSPIYDEKKDEDGFLYVTYSGENTFG 378
            KAIFIFV++ LPPT A+M  +Y E KD+DGFLYV YSGENTFG
Sbjct:   73 KAIFIFVNDTLPPTAALMFAVYQEHKDKDGFLYVKYSGENTFG 115          
The following BLAST results are available for this feature:
BLAST of CX289244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
ATG8_PICST2.130e-1376.74Autophagy-related protein 8 OS=Pichia stipitis GN=... [more]
ATG8_CANAL2.130e-1376.74Autophagy-related protein 8 OS=Candida albicans GN... [more]
ATG8_LODEL2.782e-1371.74Autophagy-related protein 8 OS=Lodderomyces elongi... [more]
ATG8_MAGGR4.745e-1376.74Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]
ATG8_CANGA4.745e-1374.42Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_PICAN6.197e-1372.09Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_DICDI1.057e-1269.77Autophagy-related protein 8 OS=Dictyostelium disco... [more]
ATG8_KLULA5.246e-1272.09Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
ATG8_ASHGO5.246e-1272.09Autophagy-related protein 8 OS=Ashbya gossypii GN=... [more]

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Properties
Property NameValue
Genbank descriptionC02010G10SK IF1 Citrus clementina cDNA clone C02010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289244 ID=CX289244; Name=CX289244; organism=Citrus clementina; type=EST; length=378bp
CCCCCCTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTCCC
ATCGAATTTAAATTATTCGCAATCATCAGTCTGATACCACATAGTTTGAA
CCGGCTTTATCCAAGCATAAAAGGTCATGTAAATAAAAAGCCGGTTTATG
ACCGGCACAAAGCCAGAAAACAGAAACCCTAAATTCAAGATGGGTAGATT
AACAAACGAAACGTTGGTAGAGGAAAAAGGGTAGCGGCAGATTATGCTAT
CCAAATGTGTTTTCACCACTGTAAGTAACATAGAGAAACCCATCTTCATC
CTTTTTTTCATCATATATGGGAGACATTATTGCTCCTGTAGGCGGGAGAA
CATTGTCCACAAATATAAAGATTGCCTT
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