CX289245

Overview
NameCX289245
Unique NameCX289245
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length409
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.017e-23
Identity = 56/118 (47.46%), Postives = 79/118 (66.95%), Query Frame = 3
Query:   54 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            S A L   FYS+TCP   + ++ V+  A  SD  + A L+RLHFHDCFV+GCD SIL++  N   SEK A   +   RGFE+++ +KA +E ACP VVSC+DI+ +AA  +++L+ GP
Sbjct:   22 SLANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVN--NGAISEKNAF-GHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGP 136          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.328e-23
Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 3
Query:   60 AQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            AQL   FY  TCP   + +  V+   +  +  + A+L+R+ FHDC V GCDAS+L+D T    SEK +   N   RGFE+ID  K  +E  CP+ VSCADI+TIA   S+AL+GGP
Sbjct:   20 AQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGP 134          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.328e-23
Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 3
Query:   66 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDS-EKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAA-ERSVALSGG 404
            L   +Y  TCP     ++  ++KA + +   GA++IR+ FHDCFV+GCDAS+LLD T    + EK AAPNN S RGFE+ID +K A+E ACP VVSCADI+  AA + S  LS G
Sbjct:   35 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQG 149          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.734e-23
Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 3
Query:   78 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGG 404
            FYS+TCPN    +   +   F SD ++   L+R+H HDCFV GCD S+LL   N   SE+ A  N N   GFEVID+ K  +E ACP VVSCADIL +AA  SV+L+ G
Sbjct:   29 FYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPN---SERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNG 133          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.958e-23
Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 3
Query:   78 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGG 404
            FYSSTCP   + ++  ++  F SD  +   ++R+HFHDCFV GCD SIL++ +   D+E+ A PN N  +GF+VI++ K  +E  CP VVSCADIL +AA  SV  + G
Sbjct:   36 FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS---DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRG 140          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.864e-23
Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = 3
Query:   78 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGG 404
            FYS TCP   + +   ++   +SD  + A ++R+HFHDCFV GCD SIL+    T +   FA   N   RG+E+ID+ K  +E ACP VVSCADIL +AA  SV LSGG
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT-EKTAFA---NLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGG 140          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 3.864e-23
Identity = 55/114 (48.25%), Postives = 71/114 (62.28%), Query Frame = 3
Query:   66 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            L   +YS++CP   + +   ++  F SD  I   L+RLHFHDCFV GCD S+L+   +   +E+ A P N   RG EVID+ KA +E  CP VVSCADIL +AA  SV LS GP
Sbjct:   29 LKNGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALP-NLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGP 138          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.046e-23
Identity = 55/118 (46.61%), Postives = 72/118 (61.02%), Query Frame = 3
Query:   54 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            S A LS +FY+S+C      + + ++ A SSD  I   L+RL FHDCFV GCDAS+L+   +T  S+    P N S  GF VID  K A+E  CP  VSCADI+ +AA  +V  +GGP
Sbjct:   25 SSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKSD----PGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGP 138          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.607e-23
Identity = 56/109 (51.38%), Postives = 73/109 (66.97%), Query Frame = 3
Query:   78 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGG 404
            FY + C NV + +  V++    S       ++R+HFHDCFV GCD S+LL + NT  SE+ A PN  S RGFEVI+  KA +E+ACPR VSCADILT+AA  +V L+GG
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL-AGNT--SERTAVPNR-SLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGG 145          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.607e-23
Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 3
Query:   54 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            S AQLS ++Y+STCP+V   ++  +   F   +    + +R+ FHDCFV+GCDAS+ + S N  D+EK A  N + A  GF+ +   K AVE  CP VVSCADIL +AA   V L GGP
Sbjct:   28 SNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENE-DAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGP 145          
The following BLAST results are available for this feature:
BLAST of CX289245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER43_ARATH1.017e-2347.46Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER8_ARATH1.328e-2346.55Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER2_MAIZE1.328e-2351.30Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER62_ARATH1.734e-2350.46Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PERN1_TOBAC2.958e-2346.79Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER2_ARAHY3.864e-2348.62Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER25_ARATH3.864e-2348.25Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER46_ARATH5.046e-2346.61Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER69_ARATH8.607e-2351.38Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER55_ARATH8.607e-2346.22Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02010G11SK IF1 Citrus clementina cDNA clone C02010G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289245 ID=CX289245; Name=CX289245; organism=Citrus clementina; type=EST; length=409bp
GTTATCTTCTCGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGGATCA
CCATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAA
TGTATTGAACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGATA
TCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTT
GATGGGTGTGATGCATCGATTTTGCTGGACAGCACTAACACCATAGACAG
CGAGAAATTTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTA
TTGATAACATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCC
TGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGG
GGGTCCGTC
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