CX289245

Overview
NameCX289245
Unique NameCX289245
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length409
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 8.607e-23
Identity = 50/117 (42.74%), Postives = 75/117 (64.10%), Query Frame = 3
Query:   57 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            ++ L   +Y  +CP     I   ++  ++    +   +IRL FHDCF++GCDAS+LLD+     SEK A+P N S +GF+VID +K+ +E  CP VVSCAD+L +AA  +V ++GGP
Sbjct:   65 RSYLHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASP-NLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGP 180          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.468e-22
Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 3
Query:   66 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            L   FYS TCP +   ++ V+  A +    +GA L+R+ FHDCFV GCD S+LLD  N    EK A P N S RGF +ID+ KAA+E+ CP +VSC+DIL + A  ++    GP
Sbjct:   26 LKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNN-QGEKSAVP-NLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGP 137          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.579e-22
Identity = 50/114 (43.86%), Postives = 70/114 (61.40%), Query Frame = 3
Query:   66 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            L   +Y S CP     +  V  +  S    + A L+R+HFHDCFV GCD S+LL S    D+E+ A PN  + +G+EV+D  K A+ER CP ++SCAD+L + A  +VA+ GGP
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGP 137          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.516e-22
Identity = 53/110 (48.18%), Postives = 70/110 (63.64%), Query Frame = 3
Query:   78 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            +Y S C NV + +  V++  + ++      ++R+HFHDCFV GCDAS+LL   N   SE+ A PN  S RGF VI+  K  +E ACPR VSCADIL +AA   V L+GGP
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGP 143          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.120e-21
Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = 3
Query:   45 GSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERS 386
            G PS  +L        C  V + +++V+  A +++ R+GASLIRL FHDCFVDGCDA +LL+ T T   E+ AA NNNS RGF VI+  K  V+   P + VSCADIL+IAA  S
Sbjct:   58 GKPSGGKLG----DEAC--VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDS 166          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.769e-21
Identity = 50/113 (44.25%), Postives = 73/113 (64.60%), Query Frame = 3
Query:   57 QAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDS-TNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVA 392
            + +L  +FY ++CP   + +  ++ K   ++  +   L+R+H+HDCFV GCDAS+LLDS      SEK A P N S  GFE+ID +K  +E+ CP  VSCADILT+AA  +V+
Sbjct:   43 EGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARP-NLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVS 154          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.723e-21
Identity = 53/120 (44.17%), Postives = 72/120 (60.00%), Query Frame = 3
Query:   48 SPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            S S A+LS +FY+ +CP     + + ++ A SSD  +   L+RL FHDCFV GCD S+L+    T  S+    P N S  GF VI+++K  +E  CP  VSCADIL +AA  +V   GGP
Sbjct:   25 SSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSD----PGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGP 140          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.168e-21
Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 3
Query:   48 SPSQAQ-LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            +P+  Q L   FY   CP     ++  + +A  +D  I A L+R+ FHDCFV GC+ S+LL+  N  D EK + PN  + RGFE+IDN+KAA+E+ CP +VSC+D+L + A  ++    GP
Sbjct:   25 APTNVQGLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKD-EKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGP 143          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.344e-20
Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 3
Query:   54 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGP 407
            S AQL   FY+ TCPNV   + + ++K          + +RL+FHDCFV+GCDAS+++ STNT  +EK    N + A  GF+ +   K AV+    C   VSCADILT+A    V L+GGP
Sbjct:   23 SSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGP 143          
BLAST of CX289245 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.344e-20
Identity = 49/119 (41.18%), Postives = 75/119 (63.03%), Query Frame = 3
Query:   54 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGP 407
            +Q++L+ +FYS TCP  L+ I D +     ++    A++IRL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+VI   K A+E ACP  VSC+DI+++A    +   GGP
Sbjct:   17 AQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGP 135          
The following BLAST results are available for this feature:
BLAST of CX289245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER48_ARATH8.607e-2342.74Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER27_ARATH1.468e-2246.49Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER1_ARATH5.579e-2243.86Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER70_ARATH9.516e-2248.18Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PERA_IPOBA2.120e-2149.57Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER24_ARATH2.769e-2144.25Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER18_ARATH4.723e-2144.17Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER56_ARATH6.168e-2142.15Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER51_ARATH2.344e-2043.80Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER31_ARATH2.344e-2041.18Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02010G11SK IF1 Citrus clementina cDNA clone C02010G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289245 ID=CX289245; Name=CX289245; organism=Citrus clementina; type=EST; length=409bp
GTTATCTTCTCGCAGCAGCTCTTCTTGTTGCTTTTGTGCTTGAGGGATCA
CCATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAA
TGTATTGAACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGATA
TCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTT
GATGGGTGTGATGCATCGATTTTGCTGGACAGCACTAACACCATAGACAG
CGAGAAATTTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTA
TTGATAACATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCC
TGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGG
GGGTCCGTC
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