CX289265

Overview
NameCX289265
Unique NameCX289265
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length422
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_BOTFB (Autophagy-related protein 8 OS=Botryotinia fuckeliana (strain B05.10) GN=atg8 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.374e-27
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = -3
Query:  202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408
            KYLVP+DLTVGQFVYVIRKRIKLS EKAIFIFV  VLPP  A+MS IY+E KDEDGFLY++YSGENTFG
Sbjct:   48 KYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116          
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_SCHPO (Autophagy-related protein 8 OS=Schizosaccharomyces pombe GN=atg8 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.145e-26
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = -3
Query:  202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408
            KYLVP+DLTVGQFVYVIRKRIKLS EKAIFIF+  +LPP  A+MS IY+E K EDGFLY+TYSGENTFG
Sbjct:   48 KYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTFG 116          
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.802e-26
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = -3
Query:  202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408
            KYLVPADLTVGQFVYVIRKRIKLS EKAIFIFV + LPP  A+MS IY+  KDEDGFLY+TYSGENTFG
Sbjct:   48 KYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTFG 116          
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_CRYNE (Autophagy-related protein 8 OS=Cryptococcus neoformans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.659e-26
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = -3
Query:  202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408
            KYLVPADLTVGQFVYVIRKRIKL+ EKAIFIFV ++LPP  A+MS IYDE KDEDGFLYV Y+ ENTFG
Sbjct:   49 KYLVPADLTVGQFVYVIRKRIKLAPEKAIFIFVDDILPPTAALMSSIYDEHKDEDGFLYVLYASENTFG 117          
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.242e-26
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = -3
Query:  202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408
            KYLVP+DLTVGQFVYVIRKRIKL+ EKAIFIFV  VLPP  A+MS IY+E KDED FLYV+YSGENTFG
Sbjct:   48 KYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTFG 116          
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_CANAL (Autophagy-related protein 8 OS=Candida albicans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.242e-26
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = -3
Query:  202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408
            KYLVP DLTVGQFVYVIRKRIKL +EKAIFIFV ++LPP  A++S IY+E KDEDGFLYV YSGENTFG
Sbjct:   48 KYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_PICPA (Autophagy-related protein 8 OS=Pichia pastoris GN=ATG8 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.152e-26
Identity = 53/69 (76.81%), Postives = 61/69 (88.41%), Query Frame = -3
Query:  202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408
            KYLVP DLTVGQFVYVIRKRIK+ +EKAIFIF+ ++LPP  A+MS +Y+E KDEDGFLYV YSGENTFG
Sbjct:   48 KYLVPCDLTVGQFVYVIRKRIKIPSEKAIFIFIDDILPPTAALMSKVYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_LODEL (Autophagy-related protein 8 OS=Lodderomyces elongisporus GN=ATG8 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.152e-26
Identity = 55/72 (76.39%), Postives = 62/72 (86.11%), Query Frame = -3
Query:  193 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG*HN 408
            KYLVP DLTVGQFVYVIRKRIKL +EKAIFIFV ++LPP  A++S IY+E KD+DGFLYV YSGENTFG  N
Sbjct:   48 KYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDDDGFLYVLYSGENTFGEQN 119          
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_DEBHA (Autophagy-related protein 8 OS=Debaryomyces hansenii GN=ATG8 PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 8.152e-26
Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = -3
Query:  202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408
            KYLVP DL+VGQFVYVIRKRIKL +EKAIFIF+ ++LPP  A+MS IY+E KDEDGFLYV YSGENTFG
Sbjct:   48 KYLVPGDLSVGQFVYVIRKRIKLPSEKAIFIFINDILPPTAALMSTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8_USTMA (Autophagy-related protein 8 OS=Ustilago maydis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.065e-25
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = -3
Query:  202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408
            KYLVP+DLTVGQFVYVIRKRIKL+ EKAIFIFV  VLP   A+MS IY+E KDEDGFLYV+YSGENTFG
Sbjct:   48 KYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPATAALMSAIYEEHKDEDGFLYVSYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of CX289265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ATG8_BOTFB7.374e-2782.61Autophagy-related protein 8 OS=Botryotinia fuckeli... [more]
ATG8_SCHPO2.145e-2679.71Autophagy-related protein 8 OS=Schizosaccharomyces... [more]
ATG8_MAGGR2.802e-2682.61Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]
ATG8_CRYNE3.659e-2681.16Autophagy-related protein 8 OS=Cryptococcus neofor... [more]
ATG8_LACBI6.242e-2681.16Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_CANAL6.242e-2679.71Autophagy-related protein 8 OS=Candida albicans GN... [more]
ATG8_PICPA8.152e-2676.81Autophagy-related protein 8 OS=Pichia pastoris GN=... [more]
ATG8_LODEL8.152e-2676.39Autophagy-related protein 8 OS=Lodderomyces elongi... [more]
ATG8_DEBHA8.152e-2678.26Autophagy-related protein 8 OS=Debaryomyces hansen... [more]
ATG8_USTMA1.065e-2581.16Autophagy-related protein 8 OS=Ustilago maydis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC02011A08SK IF1 Citrus clementina cDNA clone C02011A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289265 ID=CX289265; Name=CX289265; organism=Citrus clementina; type=EST; length=422bp
CCATCGAATTTAAATTATTCGCAATCATCATTCTTATACCACATAGTTTG
AACCGGCTATATACAAGCATAAAAGGGCATGTAAATAAAAAGCCGGATTA
TGACCGGCTCAAAGCCGGAAAACAAAAACACTAAATTCAAGATGGGTAGA
TTAACAAACGAAACGTTGGTAGAGGAAAAAGGGTAGCGGCCGATTATGCT
ATCCAAATGTGTTTTCACCACTGTAAGTAACATAGAGAAACCCATCTTCA
TCCTTTTTTTCATCATATATGGGAGACATTATTGCTCCTGGAGGCGGGAG
AACATTGCCCACAAATATAAAGATTGCCTTTTCTGCGCTCAGTTTAATTC
TCTTCCGTATCACATACACAAACTGACCCACTGTTAAGTCAGCAGGGACT
AAATATTTTGGGGGGGCCCGGT
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