CX289265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.906e-15 Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = -3 Query: 202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNVLPPPGAIMSPIYDEKKDE-DGFLYVTYSGENTFG 408 KYLVP ++ VGQF++++R R+ LS A+F+FV N LP +M +Y+ KDE DGFLY+ YS E TFG Sbjct: 49 KYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: ATG8L_DICDI (Autophagy-related protein 8-like protein DDB_G0290491 OS=Dictyostelium discoideum GN=DDB_G0290491 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.349e-14 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = -3 Query: 202 KYLVPADLTVGQFVYVIRKRIKLS---AEKAIFIFVG-NVLPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408 K+L P+++ + F+ IRK + S +KAIF+FV N LPP ++S IYD KDEDGFLY+ YSGENTFG Sbjct: 51 KFLAPSNMVITNFIMEIRKHLDDSDHNEQKAIFLFVNKNNLPPSSQLLSSIYDAHKDEDGFLYICYSGENTFG 123
BLAST of CX289265 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.343e-11 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = -3 Query: 202 KYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVGNV-LPPPGAIMSPIYDEKKDEDGFLYVTYSGENTFG 408 K+LVP +LT+ QF+ +IR R+ L A +A ++ V N L A M+ IY + KDEDGF+Y+TY+ + TFG Sbjct: 57 KFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126 The following BLAST results are available for this feature:
BLAST of CX289265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289265 ID=CX289265; Name=CX289265; organism=Citrus clementina; type=EST; length=422bpback to top |