CX289273

Overview
NameCX289273
Unique NameCX289273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length573
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 1.423e-78
Identity = 149/187 (79.68%), Postives = 163/187 (87.17%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKK-QVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            ENLGLE GYLK  F+G+ GP F T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVI+QTD   RMSLASFYNPGSDAVIYPA  L+EKEA++  QVYPK VF+DYMKLY  LKFQAKEPRF AMKA+E++    PIA+A
Sbjct:  134 ENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGT-RMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMESD----PIASA 315          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.428e-78
Identity = 149/188 (79.26%), Postives = 165/188 (87.77%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADK-KQVYPKLVFEDYMKLYVPLKFQAKEPRFAAM-KAVETNVNLGPIATA 559
            ENLGLE GYLKK+F+G  GP F ++VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKV+GLQLLKDGQWIDVPP+R SIVVNLGDQ+EVITNGKYKSV HRVI+QTD   RMSLASFYNPGSDAVI+PAP L+EKEA++ K +YPK VF+DYMKLY  LKFQAKEPRF AM KA+ET V   P+ATA
Sbjct:  134 ENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGT-RMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDYMKLYAGLKFQAKEPRFEAMIKAMET-VKSDPVATA 319          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.428e-78
Identity = 145/180 (80.56%), Postives = 157/180 (87.22%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNL 541
            ENLGLE GYLK  F+G+ GP F T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVI+QTD   RMSLASFYNPG+DAVIYPAP+L+E   + KQVYPK VF+DYMKLY  LKFQ KEPRF AMKA+E NV L
Sbjct:  134 ENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGT-RMSLASFYNPGNDAVIYPAPSLIE---ESKQVYPKFVFDDYMKLYAGLKFQPKEPRFEAMKAMEANVEL 309          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 5.408e-78
Identity = 146/188 (77.66%), Postives = 164/188 (87.23%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADK--KQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            ENLGLE  YLK  F+G+ GP F T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+WIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVI+Q D   RMSLASFYNPG+DA+IYPAPAL++KEA++  KQVYPK +F+DYMKLY  LKFQAKEPRF AMKA+E++    PIA A
Sbjct:  134 ENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGT-RMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAKEPRFEAMKAMESD----PIAIA 316          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 2.272e-76
Identity = 143/193 (74.09%), Postives = 166/193 (86.01%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANG--PTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEAD-----KKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            E+LGLE GYLKKVF G +   PTF T+VSNY PCPKP+LIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+WIDVPP+RHSIVVN+GDQ+EVITNGKYKSV HRV++QTD   RMS+ASFYNPGSDAVI+PAPAL+EKEA+     KK++YPK VF+DYM LY+  KF+AKEPRF AMK++E  ++  PI TA
Sbjct:  136 EDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTD-GNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPTA 327          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 2.968e-76
Identity = 140/186 (75.27%), Postives = 159/186 (85.48%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            ENLGLE GYLKKVF+G+ GP F T+VSNY PCPKPDLIKGLRAH+DAGGIILLFQDDKVSGLQLLKDG+W+DVPP+ HSIV+NLGDQIEVITNGKYKSV HRVI+Q+D   RMS+ASFYNPG+D+ I PAPA+LEK+ +    YPK VF+DYMKLY  LKFQAKEPRF AMKA E+     P+ATA
Sbjct:  134 ENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGT-RMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKLYSGLKFQAKEPRFEAMKAKEST----PVATA 314          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.473e-75
Identity = 139/185 (75.14%), Postives = 157/185 (84.86%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIAT 556
            ENLGLE GYLKK F+G+ GP F T+VSNY PCPKP+LIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIV+NLGDQ+EVITNGKYKSV HRVI+QTD   RMS+ASFYNPG DAVI PA  LL KE +  +VYPK VF+DYMKLY+ LKFQAKEPRF AM    ++V +GP+ +
Sbjct:  134 ENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTD-GARMSIASFYNPGDDAVISPASTLL-KENETSEVYPKFVFDDYMKLYMGLKFQAKEPRFEAMMKAMSSVKVGPVVS 316          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.924e-75
Identity = 139/186 (74.73%), Postives = 157/186 (84.41%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            ENLGLE GYLKK F+G+ GP F T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+W+DVPP+ HSIV+NLGDQIEVITNGKYKS+ HRVI+Q+D   RMS+ASFYNPG DA I PAPALLE++++    YPK +F+DYMKLY  LKFQAKEPRF AMKA ET     P+ TA
Sbjct:  134 ENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGT-RMSIASFYNPGDDAFISPAPALLEEKSEVSPTYPKFLFDDYMKLYSGLKFQAKEPRFEAMKARETT----PVETA 314          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 5.597e-75
Identity = 143/190 (75.26%), Postives = 160/190 (84.21%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANG--PTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEA-DKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAA--MKAVETNVNLGPIAT 556
            ENLGLE GYLK  F G     PTF T+VSNY PCP+P+L KGLRAHTDAGG+ILLFQDD+V+GLQLLKDG+W+DVPP+ HSIV+NLGDQ+EVITNGKYKSV HRV++QTD   RMSLASFYNPGSDAVI+PAPAL+EKEA +KK+VYPK VFEDYM LY  LKFQAKEPRF    MKAVET  NL PI T
Sbjct:  133 ENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTD-GNRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDYMNLYAGLKFQAKEPRFEVMKMKAVET-ANLSPITT 320          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 5.597e-75
Identity = 141/191 (73.82%), Postives = 165/191 (86.39%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANG--PTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEA---DKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNVNLGPIATA 559
            E+LGLE GYLK+VF G +   PTF T+VSNY PCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD +WI+VPPLR+SIVVN+GDQ+EVITNGKYKSV HRV++QTD   RMS+ASFYNPGSDAVI+PAPAL+EKEA   +KK++YPK VF+DYM LY+  KF+AKEPRF AMK++E  ++  PI TA
Sbjct:  136 EDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTD-GNRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPTA 325          
The following BLAST results are available for this feature:
BLAST of CX289273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
ACCO1_SOLLC1.423e-7879.681-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_TOBAC2.428e-7879.261-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO4_SOLLC2.428e-7880.561-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO2_SOLLC5.408e-7877.661-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_DORSP2.272e-7674.091-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO1_MALDO2.968e-7675.271-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO_PEA1.473e-7575.141-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO2_MALDO1.924e-7574.731-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO_PERAE5.597e-7575.261-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO2_DORSP5.597e-7573.821-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]

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Properties
Property NameValue
Genbank descriptionC02011B04SK IF1 Citrus clementina cDNA clone C02011B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289273 ID=CX289273; Name=CX289273; organism=Citrus clementina; type=EST; length=573bp
CGAGAATCTTGGATTAGAGAACGGGTACTTGAAAAAGGTCTTTCATGGGG
CAAACGGGCCAACCTTTGTTACCGAAGTTAGCAACTACGCACCATGCCCT
AAGCCAGATTTGATCAAGGGTCTCCGGGCTCACACCGACGCCGGCGGCAT
CATCTTGCTCTTCCAGGATGACAAAGTCAGCGGCCTTCAGCTTCTTAAAG
ATGGCCAGTGGATTGATGTGCCCCCATTGCGCCACTCCATTGTTGTCAAC
CTCGGTGACCAAATTGAGGTGATCACCAATGGAAAGTACAAGAGTGTGGA
GCACAGAGTGATTTCTCAAACCGACCGCGAGGGCCGGATGTCCCTAGCTT
CATTCTACAATCCTGGAAGTGATGCTGTGATCTATCCAGCACCAGCATTG
CTTGAAAAAGAAGCTGACAAGAAACAAGTGTACCCAAAACTTGTTTTTGA
GGACTACATGAAGCTCTATGTTCCCCTCAAGTTCCAGGCCAAGGAACCAA
GATTTGCAGCCATGAAAGCTGTGGAAACTAATGTTAACTTGGGTCCAATT
GCCACCGCTTAAACTATTATTTT
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