CX289273

Overview
NameCX289273
Unique NameCX289273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length573
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.037e-20
Identity = 56/153 (36.60%), Postives = 84/153 (54.90%), Query Frame = 2
Query:    5 NLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMK 463
            +LG+E GY ++ F  ++    +   + Y PCP+P+   G   H D   + +L QDD V GL++L DG+W  V P+  ++V+N+GD    ++NG+YKS  HR +    RE R SLA F  P  D V+ P P+     A   Q YP   + D M+
Sbjct:  210 SLGVERGYYREFFADSSS---IMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRE-RRSLAFFLCPREDRVVRPPPS-----AATPQHYPDFTWADLMR 352          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.037e-20
Identity = 56/153 (36.60%), Postives = 84/153 (54.90%), Query Frame = 2
Query:    5 NLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMK 463
            +LG+E GY ++ F  ++    +   + Y PCP+P+   G   H D   + +L QDD V GL++L DG+W  V P+  ++V+N+GD    ++NG+YKS  HR +    RE R SLA F  P  D V+ P P+     A   Q YP   + D M+
Sbjct:  210 SLGVERGYYREFFADSSS---IMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRE-RRSLAFFLCPREDRVVRPPPS-----AATPQHYPDFTWADLMR 352          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.354e-20
Identity = 60/159 (37.74%), Postives = 90/159 (56.60%), Query Frame = 2
Query:   77 VSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVP-------LKFQAKEPRFAAMKAVE 526
            V+ Y  CP+PDL  GL+ HTD G I LL Q D+V GLQ  KD    WI V P+  + VVNLGD    ++NG++K+ +H+ +  ++   R+S+A+F NP  +A++YP   L  +E +K  +   + F +  +  +        LK QAKE +  A  A E
Sbjct:  202 VNFYPKCPEPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAPEAIVYP---LKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKKQAKEQQLQAEVAAE 355          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.768e-20
Identity = 50/125 (40.00%), Postives = 80/125 (64.00%), Query Frame = 2
Query:  119 GLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAK 493
            GL  H+DA G+ LL Q ++V+GL + KD +W+ + P+  + VVN+GD IE+++NG YKS+EHR +  TD+E R+S+A+F++P     I P P L+++   K   Y  + +EDY+     +K   K
Sbjct:  224 GLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKE-RLSIAAFHDPEYGTKIGPLPDLVKENGVK---YKTIDYEDYLIRSSNIKLDGK 344          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.016e-20
Identity = 59/147 (40.14%), Postives = 83/147 (56.46%), Query Frame = 2
Query:    2 ENLGLENGYLKKV---FHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFY--NPGSDAVIY-PAPALLEKEADKK 424
            E LGL+  YLK     FH           + Y PCP+P+L  G   HTD G + +L QDD + GLQ+L    W+DVPP   S+VVN+GD +++++N KY SVEHR IS  +   RMS+  F+  +P   + +Y P   LL ++   K
Sbjct:  196 EGLGLDRSYLKDYMDCFH------LFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDD-MGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAIS-NNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPK 334          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.145e-20
Identity = 54/153 (35.29%), Postives = 87/153 (56.86%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYM 460
            E LGL    +K+V    NG  +V  +++Y P P  D   GL  HTD  G+ L+  ++ + GLQ+ KD  WI+V  +  +I+VN+GDQI +++NGKYK+V H+     ++  RMS     +P  D V+ P P L  ++   K  +  + ++DY+
Sbjct:  136 EGLGLGREAIKEV----NGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITNE-IPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKT-RMSWPVLVSPTYDMVVGPLPELTSEDDPPK--FKPIAYKDYV 280          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20
Identity = 54/152 (35.53%), Postives = 85/152 (55.92%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDY 457
            + LGL+   LK+   G     ++ +++ Y PCP+PDL  G+ AHTD  GI LL  ++ V GLQ+ KD  W D   +  +++V++GDQI  ++NG+YK+V HR     ++  RMS   F  P  + ++ P P L   +   K  +    F+DY
Sbjct:  179 DGLGLKRDALKEGL-GGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNE-VPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKT-RMSWPVFLEPPREKIVGPLPELTGDDNPPK--FKPFAFKDY 325          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20
Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAP-CPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMK 463
            E +GLE   L K     +    V    NY P CP+PDL  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG++K+ +H+ +  +    R+S+A+F NP  +A++YP   L   E +K  +   + F +  K
Sbjct:  175 EAMGLEKEALTKACVDMDQKVVV----NYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSS-TSRLSIATFQNPAPEAIVYP---LKINEGEKSIMEEPMTFMEMYK 322          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20
Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAP-CPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYP------APALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKA 520
            E +GLE G L K          +    NY P CP+PDL  G+R HTD G I +L Q D V GLQ  +DG   WI V P+  + VVNLGD    ++NG++++ +H+ +  +    R+S+A+F NP  +A++YP        A+L++     ++Y K + + ++++    K  AKE R    KA
Sbjct:  178 EAMGLEKGDLTKACVDMEQKVLI----NYYPTCPQPDLTLGVRRHTDPGTITILLQ-DMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNS-TSSRLSIATFQNPAQNAIVYPLKIREGEKAILDEAITYAEMYKKCMTK-HIEVATRKKL-AKEKRLQDEKA 351          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20
Identity = 53/140 (37.86%), Postives = 81/140 (57.86%), Query Frame = 2
Query:   47 GANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKL 466
            G +   ++ +++ Y PCP+PDL  G+ AHTD   I +L  ++ V GLQ+ KDG W D   + ++++V++GDQ+E+++NGKYKSV HR     ++  RMS   F  P  D  + P P L+ +E   K    K     Y KL
Sbjct:  193 GGDDLVYLMKINYYPPCPRPDLALGV-AHTDMSAITVLVPNE-VPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKT-RMSWPVFLEPPPDHEVGPIPKLVNEENPAKFKTKKYKDYAYCKL 329          
The following BLAST results are available for this feature:
BLAST of CX289273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
GAOX2_ORYSJ1.037e-2036.60Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI1.037e-2036.60Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
FL3H_PETHY1.354e-2037.74Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
NCS1_COPJA1.768e-2040.00S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
ACCH3_SOLLC3.016e-2040.141-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_MATIN5.145e-2035.29Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
FLS1_ARATH6.720e-2035.53Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FL3H_CALCH6.720e-2038.22Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FNSI_PETCR8.776e-2035.16Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FLS_EUSGR8.776e-2037.86Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]

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Properties
Property NameValue
Genbank descriptionC02011B04SK IF1 Citrus clementina cDNA clone C02011B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289273 ID=CX289273; Name=CX289273; organism=Citrus clementina; type=EST; length=573bp
CGAGAATCTTGGATTAGAGAACGGGTACTTGAAAAAGGTCTTTCATGGGG
CAAACGGGCCAACCTTTGTTACCGAAGTTAGCAACTACGCACCATGCCCT
AAGCCAGATTTGATCAAGGGTCTCCGGGCTCACACCGACGCCGGCGGCAT
CATCTTGCTCTTCCAGGATGACAAAGTCAGCGGCCTTCAGCTTCTTAAAG
ATGGCCAGTGGATTGATGTGCCCCCATTGCGCCACTCCATTGTTGTCAAC
CTCGGTGACCAAATTGAGGTGATCACCAATGGAAAGTACAAGAGTGTGGA
GCACAGAGTGATTTCTCAAACCGACCGCGAGGGCCGGATGTCCCTAGCTT
CATTCTACAATCCTGGAAGTGATGCTGTGATCTATCCAGCACCAGCATTG
CTTGAAAAAGAAGCTGACAAGAAACAAGTGTACCCAAAACTTGTTTTTGA
GGACTACATGAAGCTCTATGTTCCCCTCAAGTTCCAGGCCAAGGAACCAA
GATTTGCAGCCATGAAAGCTGTGGAAACTAATGTTAACTTGGGTCCAATT
GCCACCGCTTAAACTATTATTTT
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