CX289273

Overview
NameCX289273
Unique NameCX289273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length573
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20
Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 2
Query:   77 VSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYP------APALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPR 502
            V+ Y  CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD    ++NG++K+ +H+ +  ++   R+S+A+F NP  DA +YP        A+LE+     ++Y + +  D       LK  AKE R
Sbjct:  199 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAPDATVYPLKVREGEKAILEEPITFAEMYKRKMGRDLE--LARLKKLAKEER 344          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.146e-19
Identity = 55/151 (36.42%), Postives = 88/151 (58.28%), Query Frame = 2
Query:    8 LGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYM 460
            LGLE G+      G+    ++ +++ Y PCP+PDL  G+ AHTD   I LL  ++    +Q+ KDG W DV  + ++I+V++GDQ+E+++NGKYKSV HR  +    + RMS   F  P S+  + P P L+ +    K  +    ++DY+
Sbjct:  198 LGLE-GHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNE----VQVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRT-TVNKYKTRMSWPVFLEPSSEHEVGPIPNLINEANPPK--FKTKKYKDYV 340          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.146e-19
Identity = 60/157 (38.22%), Postives = 88/157 (56.05%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAP-CPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMK 463
            E +GLE   L K     +    V    NY P CP+P+L  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG++K+ +H+ +  ++   RMS+A+F NP  +A +YP   L  +E +K  +   + F +  K
Sbjct:  178 EAMGLEKEGLTKACVDMDQKVIV----NYYPKCPQPNLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN-SSRMSIATFQNPAPNATVYP---LKIREGEKAVMEEPITFAEMYK 325          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.497e-19
Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 2
Query:   77 VSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFED 454
            V+ Y  CP+PDL  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG++K+ +H+ +  ++   R+S+A+F NP  DA +YP   L  +E +   +   + F D
Sbjct:  200 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSEC-SRLSIATFQNPSPDATVYP---LAIREGENSIMEEPITFAD 322          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 1.955e-19
Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 2
Query:    2 ENLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMKLYVPLKFQAKEPRFAAMKAVETNV 535
            E +G++  Y +    G N    +  +++Y  CP PD   G   H D   I LL     V+GL++   G WI V P  ++ VVN G Q+EV+TNG  KS+EHR ++ +    R S+A+F  P  + +I PA   L KE      Y   +F D+M++Y  +K  +       +K V+  +
Sbjct:  169 EGMGIQADYFEGDLSGGN---VILNINHYPSCPNPDKALGQPPHCDRNLITLLLPG-AVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNS-ALARTSVATFIMPTQECLIGPAKEFLSKE--NPPCYRTTMFRDFMRIYNVVKLGSSLNLTTNLKNVQKEI 339          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.955e-19
Identity = 51/134 (38.06%), Postives = 80/134 (59.70%), Query Frame = 2
Query:   77 VSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPA------LLEKEADKKQVYPKLVFED 454
            V+ Y  CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD   +++NG++K+ +H+ +  ++   R+S+A+F NP  +A++YP         +LE      ++Y K + +D
Sbjct:  200 VNFYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAQEAIVYPLSVREGEKPILEAPITYTEMYKKKMSKD 331          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.553e-19
Identity = 49/107 (45.79%), Postives = 68/107 (63.55%), Query Frame = 2
Query:   62 TFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVI 382
            T    ++ Y PCPKP  + GL  HTD+  + +L+QD +V GLQL+KD +WI V P   ++++N+GD  +  +NG YKSVEHRV++    E R S A F  P  DAVI
Sbjct:  192 TCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQD-QVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVE-RFSTAYFMCPSYDAVI 296          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.553e-19
Identity = 51/128 (39.84%), Postives = 78/128 (60.94%), Query Frame = 2
Query:   77 VSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFED 454
            V+ Y  CP+PDL  GL+ HTD G I LL Q D+V GLQ  +DG   WI V P+  + VVNLGD    ++NG++K+ +H+ +  ++   R+S+A+F NP  +A +YP   L  +E +K  +   + F +
Sbjct:  200 VNFYPQCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN-HSRLSIATFQNPAPEATVYP---LKIREGEKAVLEGPITFAE 322          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.335e-19
Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 2
Query:   77 VSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD--GQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMK 463
            V+ Y  CP+PDL  GL+ HTD G I LL Q D+V GLQ  +D    WI V P+  + VVNLGD    ++NG++K+ +H+ +  ++   R+S+A+F NP  +A +YP   L  +E +K  +   + F +  K
Sbjct:  198 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAPEATVYP---LKVREGEKAIMEEPITFAEMYK 323          
BLAST of CX289273 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.267e-18
Identity = 49/153 (32.03%), Postives = 82/153 (53.59%), Query Frame = 2
Query:    5 NLGLENGYLKKVFHGANGPTFVTEVSNYAPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDREGRMSLASFYNPGSDAVIYPAPALLEKEADKKQVYPKLVFEDYMK 463
            +LG+E  Y K+ F  ++    +  ++ Y  C +P+L  G   H D   + +L QD +V GLQ+  D +W  +PP  H+ VVN+GD    +TNG+YKS  HR +  ++RE R + A F  P  + V+ P   L+      ++ YP   +  +++
Sbjct:  207 SLGVERRYFKEFFEDSDS---IFRLNYYPQCKQPELALGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERE-RKTFAFFLCPKGEKVVKPPEELVNGVKSGERKYPDFTWSMFLE 354          
The following BLAST results are available for this feature:
BLAST of CX289273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FL3H_ARATH8.776e-2038.67Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FLS_SOLTU1.146e-1936.42Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FL3H_PETCR1.146e-1938.22Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_DIACA1.497e-1940.63Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
IDS3_HORVU1.955e-1932.582'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
FL3H_MALDO1.955e-1938.06Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
G2OX8_ARATH2.553e-1945.79Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FL3H_VITVI2.553e-1939.84Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_MATIN3.335e-1938.93Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
GAOX3_ARATH1.267e-1832.03Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionC02011B04SK IF1 Citrus clementina cDNA clone C02011B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289273 ID=CX289273; Name=CX289273; organism=Citrus clementina; type=EST; length=573bp
CGAGAATCTTGGATTAGAGAACGGGTACTTGAAAAAGGTCTTTCATGGGG
CAAACGGGCCAACCTTTGTTACCGAAGTTAGCAACTACGCACCATGCCCT
AAGCCAGATTTGATCAAGGGTCTCCGGGCTCACACCGACGCCGGCGGCAT
CATCTTGCTCTTCCAGGATGACAAAGTCAGCGGCCTTCAGCTTCTTAAAG
ATGGCCAGTGGATTGATGTGCCCCCATTGCGCCACTCCATTGTTGTCAAC
CTCGGTGACCAAATTGAGGTGATCACCAATGGAAAGTACAAGAGTGTGGA
GCACAGAGTGATTTCTCAAACCGACCGCGAGGGCCGGATGTCCCTAGCTT
CATTCTACAATCCTGGAAGTGATGCTGTGATCTATCCAGCACCAGCATTG
CTTGAAAAAGAAGCTGACAAGAAACAAGTGTACCCAAAACTTGTTTTTGA
GGACTACATGAAGCTCTATGTTCCCCTCAAGTTCCAGGCCAAGGAACCAA
GATTTGCAGCCATGAAAGCTGTGGAAACTAATGTTAACTTGGGTCCAATT
GCCACCGCTTAAACTATTATTTT
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