CX289293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289293 vs. ExPASy Swiss-Prot
Match: PP135_ARATH (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana GN=At1g80270 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.471e-18 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 3 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 428 KMK++G LS T + ++ L+ + + +K+ DVL M+ +NI P +Y+I I+ GA +D+ GME IL M+ + + LD+ T A A Y A L DKA VLK+ E + + + L+S+YASLG + EV R+W + Sbjct: 254 KMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI 393
BLAST of CX289293 vs. ExPASy Swiss-Prot
Match: PPR44_ARATH (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana GN=At1g15480 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 49/142 (34.51%), Postives = 83/142 (58.45%), Query Frame = 3 Query: 3 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDL 428 KMK++G LST T N ++ LY + + +K+ DVL ++ +N+ P+ +Y+I I++ G+ +D+ GME I+ M+S+ + LD A A Y A L +KA VLK+ E +++ L+S+Y L + EV R+W + Sbjct: 252 KMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSE-GVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKI 391
BLAST of CX289293 vs. ExPASy Swiss-Prot
Match: PP234_ARATH (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana GN=At3g15590 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 3 Query: 3 KMKEMGIALSTLTYNDIMCLYSKTGQYEKVPDVLTEMKAKNIFPDNFSYRICINSYGARSDLEGMEIILREMESQPHIVLDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRL 419 KMKE+ S N ++ LYS + +K+ DVL M+ +NI P +Y INS G D+ GME I+ ++ + I LD + A +YI+A L ++A D++K+ E + Q+ L+ LYA +G+ V RL Sbjct: 267 KMKELKFPTSVFACNQLLLLYSMHDR-KKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEE-GIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRL 403 The following BLAST results are available for this feature:
BLAST of CX289293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289293 ID=CX289293; Name=CX289293; organism=Citrus clementina; type=EST; length=488bpback to top |