CX289298

Overview
NameCX289298
Unique NameCX289298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:679..1194. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_GEOSL (Adenosylhomocysteinase OS=Geobacter sulfurreducens GN=ahcY PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 2.928e-63
Identity = 120/171 (70.18%), Postives = 136/171 (79.53%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            L   P  Y K    + GV+EETTTGV RLYQM E G L FPAINVNDSVTKSKFDN+YGCR SL DG+ RATDVMIAGKVAV+CGYG+VGKGCA A++   A+V VTEIDPICALQA MEG +V+T+E     ADIFVTTTGN ++I  DHMK M++NAIVCNIGHFDNEI
Sbjct:  181 LAEKPGWYSKTAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKFDNIYGCRESLVDGIKRATDVMIAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTTTGNINVITHDHMKAMRHNAIVCNIGHFDNEI 351
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 3.824e-63
Identity = 118/155 (76.13%), Postives = 130/155 (83.87%), Query Frame = 3 
Query:   51 GVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            GVSEETTTGV RLYQ+   G LL PAINVNDSVTKSKFDNLYGCR SL DGL RA DVM+AGK+AVVCGYGDVGKG A +L+  GARVIVTEIDPICALQA MEG +V T+ED L  ADI+VTTTGNKD+I ++HM  MK+  IVCNIGHFDNEI
Sbjct:  199 GVSEETTTGVHRLYQIAATGRLLVPAINVNDSVTKSKFDNLYGCRESLADGLKRAMDVMLAGKLAVVCGYGDVGKGSAHSLRAYGARVIVTEIDPICALQAAMEGFEVRTVEDTLGQADIYVTTTGNKDVIRIEHMTAMKDQVIVCNIGHFDNEI 353
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_DESAD (Adenosylhomocysteinase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=ahcY PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 3.824e-63
Identity = 117/167 (70.06%), Postives = 136/167 (81.44%), Query Frame = 3 
Query:   15 PKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            P K+  + E++ GVSEETTTGV RLYQMQE G LLFPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKV VV GYGDVGKGCA +++  GARV+VTEIDPICALQA MEG +V T+ + +   D+FVT TGN  +I  +H+ KMK+ AI+CNIGHFDNEI
Sbjct:  181 PGKWTAIAEKVRGVSEETTTGVHRLYQMQEAGELLFPAINVNDSVTKSKFDNLYGCRESLADGIKRATDVMIAGKVVVVVGYGDVGKGCAQSMRGFGARVLVTEIDPICALQAAMEGFEVCTMANAVERGDVFVTCTGNYHVITGEHISKMKDEAIICNIGHFDNEI 347
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_OCHA4 (Adenosylhomocysteinase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 4.995e-63
Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            + A P  + + ++ + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M+G +V+TL+D  S ADI VTTTGNKD+I +DHM+K K+ AIV NIGHFDNEI
Sbjct:  172 MAATPGFFTRQRDAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIIVTTTGNKDVITIDHMRKFKDMAIVGNIGHFDNEI 342
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSU (Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 4.995e-63
Identity = 118/171 (69.01%), Postives = 138/171 (80.70%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M+G +V+TL+D  S ADI VTTTGNKD+I +DHM+KMK+  IV NIGHFDNEI
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEI 342
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSI (Adenosylhomocysteinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 4.995e-63
Identity = 118/171 (69.01%), Postives = 138/171 (80.70%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M+G +V+TL+D  S ADI VTTTGNKD+I +DHM+KMK+  IV NIGHFDNEI
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEI 342
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_BRUME (Adenosylhomocysteinase OS=Brucella melitensis GN=ahcY PE=3 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 4.995e-63
Identity = 118/171 (69.01%), Postives = 138/171 (80.70%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M+G +V+TL+D  S ADI VTTTGNKD+I +DHM+KMK+  IV NIGHFDNEI
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEI 342
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_BRUMB (Adenosylhomocysteinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 4.995e-63
Identity = 118/171 (69.01%), Postives = 138/171 (80.70%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M+G +V+TL+D  S ADI VTTTGNKD+I +DHM+KMK+  IV NIGHFDNEI
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEI 342
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_BRUC2 (Adenosylhomocysteinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 4.995e-63
Identity = 118/171 (69.01%), Postives = 138/171 (80.70%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M+G +V+TL+D  S ADI VTTTGNKD+I +DHM+KMK+  IV NIGHFDNEI
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEI 342
[Close]
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_BRUAB (Adenosylhomocysteinase OS=Brucella abortus GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 4.995e-63
Identity = 118/171 (69.01%), Postives = 138/171 (80.70%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M+G +V+TL+D  S ADI VTTTGNKD+I +DHM+KMK+  IV NIGHFDNEI
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEI 342
The following BLAST results are available for this feature:
BLAST of CX289298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
SAHH_GEOSL2.928e-6370.18Adenosylhomocysteinase OS=Geobacter sulfurreducens... [more]
SAHH_XYLFM3.824e-6376.13Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_DESAD3.824e-6370.06Adenosylhomocysteinase OS=Desulfovibrio salexigens... [more]
SAHH_OCHA44.995e-6368.42Adenosylhomocysteinase OS=Ochrobactrum anthropi (s... [more]
SAHH_BRUSU4.995e-6369.01Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE... [more]
SAHH_BRUSI4.995e-6369.01Adenosylhomocysteinase OS=Brucella suis (strain AT... [more]
SAHH_BRUME4.995e-6369.01Adenosylhomocysteinase OS=Brucella melitensis GN=a... [more]
SAHH_BRUMB4.995e-6369.01Adenosylhomocysteinase OS=Brucella melitensis biot... [more]
SAHH_BRUC24.995e-6369.01Adenosylhomocysteinase OS=Brucella canis (strain A... [more]
SAHH_BRUAB4.995e-6369.01Adenosylhomocysteinase OS=Brucella abortus GN=ahcY... [more]

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Properties
Property NameValue
Genbank descriptionC02011D10SK IF1 Citrus clementina cDNA clone C02011D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289298 ID=CX289298; Name=CX289298; organism=Citrus clementina; type=EST; length=516bp
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCA
CCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGCTCCCAGAT
GGTTTGATGAGAGCTACTGATGTTATGATTGCCGGAAAGGTTGCTGTTGT
TTGCGGTTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCTTTGAAGCAAG
CCGGTGCTCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCTCCAG
GCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGATGTCCTCTCCGA
TGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATGGTTG
ACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGGTCAC
TTTGATAATGAAATTG
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