CX289298

Overview
NameCX289298
Unique NameCX289298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:679..1194. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 4.228e-62
Identity = 119/171 (69.59%), Postives = 135/171 (78.95%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            + A P  + K K  + GVSEETTTGV RLYQMQ+ G L FPAINVNDSVTKSKFDN YGCR SL D + R TDVM+AGK A+V GYGDVGKG A +L  AGARV VTEIDPICALQA M+G +V+  EDV+ + DIFVT TGNKDI+ VDHM+ MK+ AIVCNIGHFDNEI
Sbjct:  175 IAATPGWFAKAKAAIQGVSEETTTGVMRLYQMQKRGELPFPAINVNDSVTKSKFDNRYGCRESLVDAIRRGTDVMMAGKKALVFGYGDVGKGSAESLAGAGARVYVTEIDPICALQACMDGFEVVRAEDVIGEMDIFVTATGNKDILTVDHMRAMKDMAIVCNIGHFDNEI 345          
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_BARHE (Adenosylhomocysteinase OS=Bartonella henselae GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 4.228e-62
Identity = 114/171 (66.67%), Postives = 139/171 (81.29%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            ++A P  + + +  + G+SEETTTGV RL+Q+Q+ G L FPAIN+NDSVTKSKFDN YGCR SL DG+ RATDVMIAGK A+VCGYGDVGKG AA+L  AGARV VTEIDPICALQA M+G +V+ L+D  S ADI +TTTGNKDI+ +DHM+K+K+  I+ NIGHFDNEI
Sbjct:  171 MEATPGFFTRQRAAIKGISEETTTGVHRLHQLQKEGLLPFPAININDSVTKSKFDNKYGCRESLVDGIRRATDVMIAGKTAIVCGYGDVGKGSAASLSGAGARVKVTEIDPICALQAAMDGYEVVNLDDAASSADIIITTTGNKDIVRLDHMRKVKDMCILGNIGHFDNEI 341          
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 7.213e-62
Identity = 113/161 (70.19%), Postives = 135/161 (83.85%), Query Frame = 3
Query:   33 MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            + + + GVSEETTTGV RLY + + G LLFPAINVNDSVTKSKFDNLYGC+ SL DG+ R TDVM+AGKVA+V G+GDVGKG AA+L+ AG RV+V+EIDPICALQA MEG +V+T+E+    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI
Sbjct:  184 LADSIKGVSEETTTGVHRLYNLAKEGKLLFPAINVNDSVTKSKFDNLYGCKESLVDGIRRGTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVLVSEIDPICALQAAMEGYEVVTMEEAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEI 344          
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 9.420e-62
Identity = 117/171 (68.42%), Postives = 136/171 (79.53%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            L A P  Y +++  + GV+EETTTGV RLY+MQ  G L FPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V +TEIDPICALQA MEG +V+T+++    ADIFVT TGN  +I  DHM KMK+ AIVCNIGHFD+EI
Sbjct:  178 LAAKPGWYSRIQAGIKGVTEETTTGVHRLYEMQAKGRLPFPAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVLGYGDVGKGCAQSLRGLGATVWITEIDPICALQAAMEGYRVVTMDEACDKADIFVTATGNVGVITHDHMVKMKDQAIVCNIGHFDSEI 348          
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_NITEU (Adenosylhomocysteinase OS=Nitrosomonas europaea GN=ahcY PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.230e-61
Identity = 115/171 (67.25%), Postives = 136/171 (79.53%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            L + P  Y +    + GV+EETTTGV RLY+M++ G L FPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVVCGYGDVGKGCA +L+  GA V +TEIDPICALQA MEG +V+T++D    ADIFVT TGN  +I  DHM KMK+ +I+CNIGHFD+EI
Sbjct:  184 LASHPGWYSRNLAAIRGVTEETTTGVHRLYEMEKKGELPFPAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVCGYGDVGKGCAQSLRGLGATVWITEIDPICALQAAMEGYRVVTMDDACDKADIFVTATGNLRVITHDHMLKMKDQSIICNIGHFDSEI 354          
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_COXBU (Adenosylhomocysteinase OS=Coxiella burnetii GN=ahcY PE=3 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 1.230e-61
Identity = 115/166 (69.28%), Postives = 136/166 (81.93%), Query Frame = 3
Query:   18 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            +K+ ++ + + GVSEETTTGV RLY+M + G+L FPAINVNDSVTKSKFDNLYGCR SL D + RATDVMIAGK  VVCGYGDVGKGCA +L+  GA V +TEIDPICALQA MEG +V+T++++   ADIFVT TGN DII  +HM KMK+ AIVCNIGHFDNEI
Sbjct:  149 QKHPELCQNIRGVSEETTTGVHRLYRMLKEGSLKFPAINVNDSVTKSKFDNLYGCRESLIDSIKRATDVMIAGKRVVVCGYGDVGKGCAQSLRAYGATVYITEIDPICALQAAMEGYRVVTMDEMADSADIFVTATGNTDIITHEHMLKMKDQAIVCNIGHFDNEI 314          
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_COXBN (Adenosylhomocysteinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ahcY PE=3 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 1.230e-61
Identity = 115/166 (69.28%), Postives = 136/166 (81.93%), Query Frame = 3
Query:   18 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            +K+ ++ + + GVSEETTTGV RLY+M + G+L FPAINVNDSVTKSKFDNLYGCR SL D + RATDVMIAGK  VVCGYGDVGKGCA +L+  GA V +TEIDPICALQA MEG +V+T++++   ADIFVT TGN DII  +HM KMK+ AIVCNIGHFDNEI
Sbjct:  149 QKHPELCQNIRGVSEETTTGVHRLYRMLKEGSLKFPAINVNDSVTKSKFDNLYGCRESLIDSIKRATDVMIAGKRVVVCGYGDVGKGCAQSLRAYGATVYITEIDPICALQAAMEGYRVVTMDEMADSADIFVTATGNTDIITHEHMLKMKDQAIVCNIGHFDNEI 314          
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_COXB2 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuG_Q212) GN=ahcY PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.230e-61
Identity = 115/166 (69.28%), Postives = 136/166 (81.93%), Query Frame = 3
Query:   18 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            +K+ ++ + + GVSEETTTGV RLY+M + G+L FPAINVNDSVTKSKFDNLYGCR SL D + RATDVMIAGK  VVCGYGDVGKGCA +L+  GA V +TEIDPICALQA MEG +V+T++++   ADIFVT TGN DII  +HM KMK+ AIVCNIGHFDNEI
Sbjct:  149 QKHPELCQNIRGVSEETTTGVHRLYRMLKEGSLKFPAINVNDSVTKSKFDNLYGCRESLIDSIKRATDVMIAGKRVVVCGYGDVGKGCAQSLRAYGATVYITEIDPICALQAAMEGYRVVTMDEMADSADIFVTATGNTDIITHEHMLKMKDQAIVCNIGHFDNEI 314          
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.230e-61
Identity = 115/166 (69.28%), Postives = 136/166 (81.93%), Query Frame = 3
Query:   18 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            +K+ ++ + + GVSEETTTGV RLY+M + G+L FPAINVNDSVTKSKFDNLYGCR SL D + RATDVMIAGK  VVCGYGDVGKGCA +L+  GA V +TEIDPICALQA MEG +V+T++++   ADIFVT TGN DII  +HM KMK+ AIVCNIGHFDNEI
Sbjct:  149 QKHPELCQNIRGVSEETTTGVHRLYRMLKEGSLKFPAINVNDSVTKSKFDNLYGCRESLIDSIKRATDVMIAGKRVVVCGYGDVGKGCAQSLRAYGATVYITEIDPICALQAAMEGYRVVTMDEMADSADIFVTATGNTDIITHEHMLKMKDQAIVCNIGHFDNEI 314          
BLAST of CX289298 vs. ExPASy Swiss-Prot
Match: SAHH_BURTA (Adenosylhomocysteinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.230e-61
Identity = 118/171 (69.01%), Postives = 135/171 (78.95%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 515
            L+ D   Y K    + GV+EETTTGV RLYQM+++G L FPA NVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V VTEIDPICALQA MEG +V+T+E     ADIFVT TGN  +I  DHMK M++NAIVCNIGHFD+EI
Sbjct:  179 LEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEI 349          
The following BLAST results are available for this feature:
BLAST of CX289298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
SAHH_MARMM4.228e-6269.59Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]
SAHH_BARHE4.228e-6266.67Adenosylhomocysteinase OS=Bartonella henselae GN=a... [more]
SAHH_METPB7.213e-6270.19Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_METCA9.420e-6268.42Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_NITEU1.230e-6167.25Adenosylhomocysteinase OS=Nitrosomonas europaea GN... [more]
SAHH_COXBU1.230e-6169.28Adenosylhomocysteinase OS=Coxiella burnetii GN=ahc... [more]
SAHH_COXBN1.230e-6169.28Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB21.230e-6169.28Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB11.230e-6169.28Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_BURTA1.230e-6169.01Adenosylhomocysteinase OS=Burkholderia thailandens... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02011D10SK IF1 Citrus clementina cDNA clone C02011D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289298 ID=CX289298; Name=CX289298; organism=Citrus clementina; type=EST; length=516bp
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCA
CCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGCTCCCAGAT
GGTTTGATGAGAGCTACTGATGTTATGATTGCCGGAAAGGTTGCTGTTGT
TTGCGGTTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCTTTGAAGCAAG
CCGGTGCTCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCTCCAG
GCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGATGTCCTCTCCGA
TGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATGGTTG
ACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGGTCAC
TTTGATAATGAAATTG
back to top