CX289307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RICAE (50S ribosomal protein L14 OS=Rickettsia africae (strain ESF-5) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.021e-11 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQV 436 IQM+++L+V DNSGAK VMCI+ L G VA+LGD IV SVK+A+P GKVKKG V Sbjct: 2 IQMQSILEVADNSGAKKVMCIKVLGGSHHMVAKLGDVIVVSVKDAIPGGKVKKGDV 57
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_NAUPA (50S ribosomal protein L14 OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.021e-11 Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQ T LKV DNSGAK +MCI+ L G R+ A +GD IVASVK+A+P GK+KKGQVV Sbjct: 2 IQPFTRLKVADNSGAKEIMCIKVLGGSKRRYASVGDIIVASVKKALPNGKIKKGQVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_GEOUR (50S ribosomal protein L14 OS=Geobacter uraniireducens (strain Rf4) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.021e-11 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T+L V DNSGAK + CI+ L G RK A +GD IVASVKEA+P KVKKG VV Sbjct: 2 IQMQTILDVADNSGAKKLFCIKVLGGSKRKYAGIGDIIVASVKEAIPNSKVKKGDVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_GEOSF (50S ribosomal protein L14 OS=Geobacter sp. (strain FRC-32) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.021e-11 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T+L V DNSGAK + CI+ L G RK A +GD IVASVKEA+P KVKKG VV Sbjct: 2 IQMQTILDVADNSGAKKLFCIKVLGGSKRKYAGIGDIIVASVKEAIPNSKVKKGDVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_CLOTH (50S ribosomal protein L14 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.021e-11 Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQ++T+LKV DN+GAK VMCI+ L G RK A +GD IVASVK+A P G VKKG VV Sbjct: 2 IQVQTMLKVADNTGAKKVMCIKVLGGSKRKYANIGDVIVASVKDATPGGVVKKGDVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RICTY (50S ribosomal protein L14 OS=Rickettsia typhi GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.333e-11 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQV 436 IQM+++L+V DNSGAK VMCI+ L G +A+LGD IV S+KEA+P GKVKKG V Sbjct: 2 IQMQSILEVADNSGAKKVMCIKVLGGSHHMMAKLGDVIVVSIKEAIPGGKVKKGDV 57
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RICPR (50S ribosomal protein L14 OS=Rickettsia prowazekii GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.333e-11 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQV 436 IQM+++L+V DNSGAK VMCI+ L G +A+LGD IV S+KEA+P GKVKKG V Sbjct: 2 IQMQSILEVADNSGAKKVMCIKVLGGSHHMMAKLGDVIVVSIKEAIPGGKVKKGDV 57
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_ARCB4 (50S ribosomal protein L14 OS=Arcobacter butzleri (strain RM4018) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.333e-11 Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQ T L V DN+GAK +MCI+ L G R+ A +GD IVASVK+A+PTGK+KKGQVV Sbjct: 2 IQSFTRLNVADNTGAKEIMCIKVLGGSKRRYATVGDVIVASVKKALPTGKIKKGQVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RICM5 (50S ribosomal protein L14 OS=Rickettsia massiliae (strain Mtu5) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.741e-11 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQV 436 IQM+++L+V DNSGAK VMCI+ L G VA+LGD IV SVK+A+P GKVKKG V Sbjct: 2 IQMQSMLEVADNSGAKKVMCIKVLGGSHHMVAKLGDVIVVSVKDAIPGGKVKKGDV 57
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_BDEBA (50S ribosomal protein L14 OS=Bdellovibrio bacteriovorus GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.741e-11 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQV 436 IQM+T L V DNSGAK VMC++ L G R+VA +GD IV S+KEA+P KVKKG V Sbjct: 2 IQMQTRLNVADNSGAKEVMCVKVLGGSKRRVASIGDVIVVSIKEALPNAKVKKGDV 57 The following BLAST results are available for this feature:
BLAST of CX289307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289307 ID=CX289307; Name=CX289307; organism=Citrus clementina; type=EST; length=443bpback to top |