CX289307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_CAUCR (50S ribosomal protein L14 OS=Caulobacter crescentus GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPL--KGRKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L+V DNSGA+ VMCI+ L GR+ A +GD IV SVKEA+P G+VKKG V+ Sbjct: 2 IQMQTNLEVADNSGARRVMCIKVLGGAGRRYASVGDVIVVSVKEAIPRGRVKKGDVL 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_CAUCN (50S ribosomal protein L14 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPL--KGRKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L+V DNSGA+ VMCI+ L GR+ A +GD IV SVKEA+P G+VKKG V+ Sbjct: 2 IQMQTNLEVADNSGARRVMCIKVLGGAGRRYASVGDVIVVSVKEAIPRGRVKKGDVL 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_CAMLR (50S ribosomal protein L14 OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQ T L V DNSGAK +MCI+ L G R+ A +GD IVASVK+A+P GKVKKGQVV Sbjct: 2 IQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVKKALPNGKVKKGQVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_CAMJR (50S ribosomal protein L14 OS=Campylobacter jejuni (strain RM1221) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQ T L V DNSGAK +MCI+ L G R+ A +GD IVASVK+A+P GKVKKGQVV Sbjct: 2 IQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVKKALPNGKVKKGQVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_CAMJJ (50S ribosomal protein L14 OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQ T L V DNSGAK +MCI+ L G R+ A +GD IVASVK+A+P GKVKKGQVV Sbjct: 2 IQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVKKALPNGKVKKGQVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_CAMJE (50S ribosomal protein L14 OS=Campylobacter jejuni GN=rplN PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQ T L V DNSGAK +MCI+ L G R+ A +GD IVASVK+A+P GKVKKGQVV Sbjct: 2 IQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVKKALPNGKVKKGQVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_CAMJD (50S ribosomal protein L14 OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQ T L V DNSGAK +MCI+ L G R+ A +GD IVASVK+A+P GKVKKGQVV Sbjct: 2 IQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVKKALPNGKVKKGQVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_CAMJ8 (50S ribosomal protein L14 OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQ T L V DNSGAK +MCI+ L G R+ A +GD IVASVK+A+P GKVKKGQVV Sbjct: 2 IQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVKKALPNGKVKKGQVV 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_AZOC5 (50S ribosomal protein L14 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplN PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L V DNSGA+ VMCI+ L G RK A +GD IV SVKEA+P G+VKKG V+ Sbjct: 2 IQMQTNLDVADNSGARRVMCIKVLGGSKRKYAHVGDIIVVSVKEAIPRGRVKKGDVM 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_ANASK (50S ribosomal protein L14 OS=Anaeromyxobacter sp. (strain K) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQV 436 IQ +T+L V DNSGAK VMCI+ L G RK A +GD IV S+KEA+P KVKKG+V Sbjct: 2 IQQQTMLDVADNSGAKRVMCIKVLGGTRRKYASIGDVIVVSIKEAIPQAKVKKGEV 57 The following BLAST results are available for this feature:
BLAST of CX289307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289307 ID=CX289307; Name=CX289307; organism=Citrus clementina; type=EST; length=443bpback to top |