CX289307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_ANADE (50S ribosomal protein L14 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQV 436 IQ +T+L V DNSGAK VMCI+ L G RK A +GD IV S+KEA+P KVKKG+V Sbjct: 2 IQQQTMLDVADNSGAKRVMCIKVLGGTRRKYASIGDVIVVSIKEAIPQAKVKKGEV 57
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_ANAD2 (50S ribosomal protein L14 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQV 436 IQ +T+L V DNSGAK VMCI+ L G RK A +GD IV S+KEA+P KVKKG+V Sbjct: 2 IQQQTMLDVADNSGAKRVMCIKVLGGTRRKYASIGDVIVVSIKEAIPQAKVKKGEV 57
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_AGRRK (50S ribosomal protein L14 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.879e-11 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L V DNSGA+ VMCI+ L G RK A +GD IV S+KEA+P G+VKKG V+ Sbjct: 2 IQMQTNLDVADNSGARRVMCIKVLGGSKRKYASIGDVIVVSIKEAIPRGRVKKGDVM 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_SINMW (50S ribosomal protein L14 OS=Sinorhizobium medicae (strain WSM419) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.067e-11 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L V DNSGA+ VMCI+ L G RK A +GD IV S+KEA+P G+VKKG V+ Sbjct: 2 IQMQTNLDVADNSGARRVMCIKVLGGSKRKYASIGDIIVVSIKEAIPRGRVKKGDVM 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RHOPS (50S ribosomal protein L14 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.067e-11 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L V DNSGA+ VMCI+ L G R+ A +GD IV S+KEA+P GKVKKG V+ Sbjct: 2 IQMQTNLDVADNSGARRVMCIKVLGGSKRRYATVGDVIVVSIKEAIPRGKVKKGDVM 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RHOPB (50S ribosomal protein L14 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.067e-11 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L V DNSGA+ VMCI+ L G R+ A +GD IV S+KEA+P GKVKKG V+ Sbjct: 2 IQMQTNLDVADNSGARRVMCIKVLGGSKRRYATVGDVIVVSIKEAIPRGKVKKGDVM 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RHOP5 (50S ribosomal protein L14 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.067e-11 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L V DNSGA+ VMCI+ L G R+ A +GD IV S+KEA+P GKVKKG V+ Sbjct: 2 IQMQTNLDVADNSGARRVMCIKVLGGSKRRYATVGDVIVVSIKEAIPRGKVKKGDVM 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RHOP2 (50S ribosomal protein L14 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.067e-11 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L V DNSGA+ VMCI+ L G R+ A +GD IV S+KEA+P GKVKKG V+ Sbjct: 2 IQMQTNLDVADNSGARRVMCIKVLGGSKRRYATVGDVIVVSIKEAIPRGKVKKGDVM 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RHISN (50S ribosomal protein L14 OS=Rhizobium sp. (strain NGR234) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.067e-11 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L V DNSGA+ VMCI+ L G RK A +GD IV S+KEA+P G+VKKG V+ Sbjct: 2 IQMQTNLDVADNSGARRVMCIKVLGGSKRKYASIGDIIVVSIKEAIPRGRVKKGDVM 58
BLAST of CX289307 vs. ExPASy Swiss-Prot
Match: RL14_RHIME (50S ribosomal protein L14 OS=Rhizobium meliloti GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.067e-11 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 275 IQMRTVLKVVDNSGAKTVMCIQPLKG--RKVARLGDTIVASVKEAMPTGKVKKGQVV 439 IQM+T L V DNSGA+ VMCI+ L G RK A +GD IV S+KEA+P G+VKKG V+ Sbjct: 2 IQMQTNLDVADNSGARRVMCIKVLGGSKRKYASIGDIIVVSIKEAIPRGRVKKGDVM 58 The following BLAST results are available for this feature:
BLAST of CX289307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289307 ID=CX289307; Name=CX289307; organism=Citrus clementina; type=EST; length=443bpback to top |