CX289311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: HPCE_ECOLX (Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase OS=Escherichia coli GN=hpcE PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 8.006e-27 Identity = 62/143 (43.36%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTP-ISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426 K ++ G+ T P+ ++ +H+E EL VVIG++AR+V E AMDYV GY V D R+ + L K +D TP +S+++PK A+PDPHNL L V+GE+RQ+G+T D+IF +P+LI+++S MTL GD+I Sbjct: 252 KAPNTLTGDNQTSVRPNNIEYMHYEAELVVVIGKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLR---VKSRDGLTPMLSTIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMI 391
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: HPAG_ECOLX (4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase OS=Escherichia coli GN=hpaG PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 8.006e-27 Identity = 62/143 (43.36%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTP-ISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426 K ++ G+ T P+ ++ +H+E EL VVIG++AR+V E AMDYV GY V D R+ + L K +D TP +S+++PK A+PDPHNL L V+GE+RQ+G+T D+IF +P+LI+++S MTL GD+I Sbjct: 252 KAPNTLTGDNQTSVRPNNIEYMHYEAELVVVIGKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLR---VKSRDGLTPMLSTIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMI 391
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: UGL_BURCJ (Ureidoglycolate lyase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=BceJ2315_61450 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.493e-25 Identity = 64/143 (44.76%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426 K TSS G I++P EVEL VVIG K +DV E A+DYV GY V D++ RE Q G W KG DTF PI ++ + VPDP L+LWL +DG Q G+T+ M+F + LI+++S+ MTL GDVI Sbjct: 100 KWTSSICGPNDGIDIPKGSVKTDWEVELGVVIGAKCKDVDEARALDYVAGYCVVNDVSEREWQIER---GGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLIAYLSTCMTLQPGDVI 239
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: UGL_BURM1 (Ureidoglycolate lyase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=Bmul_3283 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.786e-25 Identity = 65/143 (45.45%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426 K TSS G I++P EVEL VVIG +DV E A+DYV GY V D++ RE Q G W KG DTF PI ++ + VPDP +L+LWL VDG Q G+T+ M+F + LI+++SS MTL GDVI Sbjct: 100 KWTSSICGPNDGIDIPKGSVKTDWEVELGVVIGAPCKDVDEARALDYVAGYCVVNDVSEREWQIER---GGQWDKGKGFDTFGPIGPWLVTRDEVPDPQSLDLWLEVDGHRYQNGNTRTMVFTVAQLIAYLSSCMTLQPGDVI 239
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: UGL_BURCH (Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain HI2424) GN=Bcen2424_5521 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.786e-25 Identity = 63/143 (44.06%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426 K TSS G I++P EVEL VVIG K +DV E A+DYV GY V D++ RE Q G W KG DTF PI ++ + VPDP L+LWL +DG Q G+T+ M+F + L++++S+ MTL GDVI Sbjct: 100 KWTSSICGPNDGIDIPKGSVKTDWEVELGVVIGAKCKDVDEARALDYVAGYCVVNDVSEREWQIER---GGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVI 239
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: UGL_BURCC (Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain MC0-3) GN=Bcenmc03_4750 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.786e-25 Identity = 63/143 (44.06%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426 K TSS G I++P EVEL VVIG K +DV E A+DYV GY V D++ RE Q G W KG DTF PI ++ + VPDP L+LWL +DG Q G+T+ M+F + L++++S+ MTL GDVI Sbjct: 100 KWTSSICGPNDGIDIPKGSVKTDWEVELGVVIGAKCKDVDEARALDYVAGYCVVNDVSEREWQIER---GGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVI 239
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: UGL_BURCA (Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain AU 1054) GN=Bcen_5340 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.786e-25 Identity = 63/143 (44.06%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426 K TSS G I++P EVEL VVIG K +DV E A+DYV GY V D++ RE Q G W KG DTF PI ++ + VPDP L+LWL +DG Q G+T+ M+F + L++++S+ MTL GDVI Sbjct: 100 KWTSSICGPNDGIDIPKGSVKTDWEVELGVVIGAKCKDVDEARALDYVAGYCVVNDVSEREWQIER---GGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVI 239
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: YCGM_ECOLI (Uncharacterized protein ycgM OS=Escherichia coli (strain K12) GN=ycgM PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.278e-24 Identity = 61/144 (42.36%), Postives = 82/144 (56.94%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSA-VPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVIL 429 KP ++ + +P S+HHEVELAV+IG R E + GY VALD+T R++Q K AG PW AK D P+S +P + DP N L L+V+GE RQ+G+T DMI I LI+++S TL GDV+L Sbjct: 46 KPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDLTLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLSLSVNGEQRQQGTTADMIHKIVPLIAYMSKFFTLKAGDVVL 189
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: UGL_BURS3 (Ureidoglycolate lyase OS=Burkholderia sp. (strain 383) GN=Bcep18194_B0137 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.669e-24 Identity = 64/143 (44.76%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426 K TSS G I++P EVEL VVIG +DV E A+DYV GY V D++ RE Q G W KG DTF PI ++ + VPDP L+LWL +DG Q G+T+ M+F + LI+++SS MTL GDVI Sbjct: 100 KWTSSICGPNDGIDIPKGSVKTDWEVELGVVIGATCKDVDEARALDYVAGYCVVNDVSEREWQIER---GGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLIAYLSSCMTLQPGDVI 239
BLAST of CX289311 vs. ExPASy Swiss-Prot
Match: UGL_BURCM (Ureidoglycolate lyase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=Bamb_4846 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.719e-24 Identity = 63/143 (44.06%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 1 KPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISS-VLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVI 426 K TSS G I++P EVEL VVIG +DV E A+DYV GY V D++ RE Q G W KG DTF PI ++ + VPDP L+LWL VDG Q G+T+ M+F + L++++S+ MTL GDVI Sbjct: 100 KWTSSICGPNDGIDIPKGSVKTDWEVELGVVIGTTCKDVDEARALDYVAGYCVVNDVSEREWQIER---GGQWDKGKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEVDGHRYQNGNTRTMVFTVAQLVAYLSTCMTLQPGDVI 239 The following BLAST results are available for this feature:
BLAST of CX289311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289311 ID=CX289311; Name=CX289311; organism=Citrus clementina; type=EST; length=430bpback to top |