CX289314

Overview
NameCX289314
Unique NameCX289314
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length386
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: DJC10_PONAB (DnaJ homolog subfamily C member 10 OS=Pongo abelii GN=DNAJC10 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.879e-12
Identity = 39/127 (30.71%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVGLTADNFDEIVLDKSKDV--LVEFYAPWWGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKY 375
            +DC  H+ LC+ Y +Q YPT   F + ++   +YEG  SAE + E++ +          +  +VV LT   F+E+V  +  +   +V+FY+PW   C+ L P ++++A   TL   + V ++D  +Y
Sbjct:  506 LDCTVHEGLCNMYNIQAYPTTVVFNQSNIH--EYEGHHSAEQILEFIED---------LMNPSVVSLTPTTFNELVTQRKHNEVWMVDFYSPWCHPCQVLMPEWKRMAR--TLTGLINVGSIDCQQY 619          

HSP 2 Score: 65.855 bits (159), Expect = 7.517e-11
Identity = 38/125 (30.40%), Postives = 59/125 (47.20%), Query Frame = 1
Query:    1 VDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVGLTADNFDEIVLDKSKDVLVEFYAPWWGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKY 375
            +DC ++ S C++  VQ YP I++FP  S +  +Y         A  +   G     +  +P    GLT   F E VL      +++FYAPW G C+N AP +E +A    ++  V    +D   Y
Sbjct:  614 IDCQQYHSFCAQENVQRYPEIRFFPPKSNKAYQYHSYNGWNRDAYSLRIWG-----LGFLPQVSTGLTPQTFSEKVLQGKNHWVIDFYAPWCGPCQNFAPEFELLAR--MIKGKVKAGKVDCQAY 731          
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: DJC10_HUMAN (DnaJ homolog subfamily C member 10 OS=Homo sapiens GN=DNAJC10 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.879e-12
Identity = 39/127 (30.71%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVGLTADNFDEIVLDKSKDV--LVEFYAPWWGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKY 375
            +DC  H+ LC+ Y +Q YPT   F + ++   +YEG  SAE + E++ +          +  +VV LT   F+E+V  +  +   +V+FY+PW   C+ L P ++++A   TL   + V ++D  +Y
Sbjct:  506 LDCTVHEGLCNMYNIQAYPTTVVFNQSNIH--EYEGHHSAEQILEFIED---------LMNPSVVSLTPTTFNELVTQRKHNEVWMVDFYSPWCHPCQVLMPEWKRMAR--TLTGLINVGSIDCQQY 619          
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: PDIA5_RAT (Protein disulfide-isomerase A5 OS=Rattus norvegicus GN=Pdia5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11
Identity = 42/125 (33.60%), Postives = 65/125 (52.00%), Query Frame = 1
Query:   13 EHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVP-----SNVVGLTADNFDEIVLDKSKDVLVEFYAPWWGHCKNLAPTYEKVAAAF--TLEDDVVVANLDA 366
            E +++  +Y V+GYPTI +F KG    +      +AE + E++ N      ++   P      +V  LT ++FD+ V + S  VLV F+APW GHCK + P +E  A       E   V+A +DA
Sbjct:  212 EFENIKEEYNVRGYPTICYFEKGRFLFQYENYGSTAEDIVEWLKNPQPPQPQVPETPWADEGGSVYHLTDEDFDQFVKEHSS-VLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDA 335          
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.583e-11
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 1
Query:  184 SNVVGLTADNFDEIVLDKSKDVLVEFYAPWWGHCKNLAPTYEKVAAAF-TLEDDVVVANLD 363
            S+V  L   N DEIV D  KDVLV +YAPW GHCK LAPTY+++A  +     DV++A LD
Sbjct:  376 SSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLD 436          
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: PDIA5_BOVIN (Protein disulfide-isomerase A5 OS=Bos taurus GN=PDIA5 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.583e-11
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 1
Query:   13 EHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVP-----SNVVGLTADNFDEIVLDKSKDVLVEFYAPWWGHCKNLAPTYEKVAAAFTLEDDV--VVANLDADKYKDL 384
            E +++  +Y V+GYPTI +F KG    +      +AE + E++ N      ++   P      +V  L+ ++FD+ V + S  VLV F+APW GHCK + P +E  A     E D   V+A +DA   K L
Sbjct:  216 EFENIKEEYSVRGYPTICYFEKGRFLFQYDSYGSTAEDIVEWLKNPQPPQPQVPETPWADEGGSVYHLSDEDFDQFVKEHSS-VLVMFHAPWCGHCKKMKPEFESAAEVLHGEGDSSGVLAAVDATVNKAL 345          
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: PDIA1_RABIT (Protein disulfide-isomerase OS=Oryctolagus cuniculus GN=P4HB PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.583e-11
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 1
Query:  199 LTADNFDEIVLDKSKDVLVEFYAPWWGHCKNLAPTYEKVAAAFTLEDDVVVANLDA 366
            L   NF+E+  D+ K+V VEFYAPW GHCK LAP ++K+   +    D+V+A +D+
Sbjct:  373 LVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKEHQDIVIAKMDS 428          
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: PDIA5_MOUSE (Protein disulfide-isomerase A5 OS=Mus musculus GN=Pdia5 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.374e-11
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 1
Query:   13 EHKSLCSKYGVQGYPTIQWFPKGS-LEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVP-----SNVVGLTADNFDEIVLDKSKDVLVEFYAPWWGHCKNLAPTYEKVAAAF--TLEDDVVVANLDA 366
            E +++  +Y V+GYPTI +F KG  L P +  G  +AE + E++ N      ++   P      +V  LT ++FD+ V + S  VLV F+APW GHCK + P +E  A       E   V+A +DA
Sbjct:  212 EFENIKEEYNVRGYPTICYFEKGRFLFPYENYGS-TAEDIVEWLKNPLPPQPQVPETPWADEGGSVYHLTDEDFDQFVKEHSS-VLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDA 335          
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:   94 KKYEGPR-SAEALAEYVNN-EGGT---NVKIAAVPSN----VVGLTADNFDEIVLDKSKDVLVEFYAPWWGHCKNLAPTYEKVAAAFTLEDDVVVANLDA 366
            KKY+  + S +A ++++N  E G    +VK   +P++    V  L A NFDEIV ++ KDV+V F+A W GHCKNL P YE+ A+    E ++V+A +DA
Sbjct:  319 KKYKLEKFSLDAFSDFLNKFEDGLLTPHVKSEPLPTDDSSAVKKLVALNFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDA 418          
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 1
Query:  199 LTADNFDEIVLDKSKDVLVEFYAPWWGHCKNLAPTYEKVAAAFTLEDDVVVANLDA 366
            L   NF+E+  D++K+V VEFYAPW GHCK LAP ++K+   +   +++V+A +D+
Sbjct:  374 LVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDS 429          
BLAST of CX289314 vs. ExPASy Swiss-Prot
Match: PDIA1_CHICK (Protein disulfide-isomerase OS=Gallus gallus GN=P4HB PE=1 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 1
Query:  199 LTADNFDEIVLDKSKDVLVEFYAPWWGHCKNLAPTYEKVAAAFTLEDDVVVANLDA 366
            L   NF+E+  D++K+V VEFYAPW GHCK LAP ++K+   +   +++V+A +D+
Sbjct:  377 LVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYRDHENIVIAKMDS 432          
The following BLAST results are available for this feature:
BLAST of CX289314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
DJC10_PONAB8.879e-1230.71DnaJ homolog subfamily C member 10 OS=Pongo abelii... [more]
DJC10_HUMAN8.879e-1230.71DnaJ homolog subfamily C member 10 OS=Homo sapiens... [more]
PDIA5_RAT1.978e-1133.60Protein disulfide-isomerase A5 OS=Rattus norvegicu... [more]
PDI_YEAST2.583e-1154.10Protein disulfide-isomerase OS=Saccharomyces cerev... [more]
PDIA5_BOVIN2.583e-1133.59Protein disulfide-isomerase A5 OS=Bos taurus GN=PD... [more]
PDIA1_RABIT2.583e-1146.43Protein disulfide-isomerase OS=Oryctolagus cunicul... [more]
PDIA5_MOUSE3.374e-1135.71Protein disulfide-isomerase A5 OS=Mus musculus GN=... [more]
ERP60_SCHMA4.407e-1142.00Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
PDIA1_MACFU5.755e-1144.64Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_CHICK5.755e-1144.64Protein disulfide-isomerase OS=Gallus gallus GN=P4... [more]

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Properties
Property NameValue
Genbank descriptionC02011F02SK IF1 Citrus clementina cDNA clone C02011F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289314 ID=CX289314; Name=CX289314; organism=Citrus clementina; type=EST; length=386bp
GTGGACTGTGACGAGCATAAGAGCTTATGCAGCAAATATGGTGTTCAAGG
ATACCCAACAATTCAATGGTTTCCTAAAGGTTCTTTGGAACCCAAAAAGT
ATGAAGGGCCACGATCTGCTGAAGCCCTTGCTGAGTATGTGAATAATGAA
GGAGGAACCAATGTGAAGATAGCTGCAGTCCCATCCAATGTGGTGGGACT
AACAGCTGATAATTTTGATGAGATAGTTTTGGACAAAAGCAAAGATGTTT
TGGTTGAATTTTATGCACCATGGTGGGGCCATTGCAAAAACCTTGCGCCT
ACATATGAAAAGGTGGCAGCCGCATTTACATTGGAAGATGATGTAGTTGT
TGCTAATTTGGATGCTGACAAATACAAGGATCTGGC
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