CX289353

Overview
NameCX289353
Unique NameCX289353
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length370
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: CBK1_KLULA (Serine/threonine-protein kinase CBK1 OS=Kluyveromyces lactis GN=CBK1 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.857e-16
Identity = 47/136 (34.56%), Postives = 82/136 (60.29%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG-SEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVES--QTPKRTGSGPMRKTMLT----------PKDLSFVGYTYKNFEAVKDKRS 369
            ++++  L+FP++  ++ EA+DLI RLL   E+RLG  G +++IKAHP+F  + W+ + ++EA Y P+++ V DT+ F   DE+E+   +P    +   R+ M+T           +DL F+GYTY  F+ +  K +
Sbjct:  583 MNFEQTLQFPDDIHISYEAEDLIRRLLTHSENRLGRHGGADEIKAHPFFSGVDWNTIRQVEAPYIPKLSSVTDTR-FFPTDELENVPDSPAMAQAARQREQMMTQQQGVPQSNAKEDLPFIGYTYSRFDYLTRKNA 717          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: CBK1_YARLI (Serine/threonine-protein kinase CBK1 OS=Yarrowia lipolytica GN=CBK1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.704e-15
Identity = 40/119 (33.61%), Postives = 73/119 (61.34%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTL-GSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEV--ESQTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFE 348
            ++W+  L+FP++  L+PE++DLI RLL   E+RLG + G+ +IK+HP+F+ + W  + E  A + P+++ + DT ++   DE+   S+ P+++             DL F+GYT+  F+
Sbjct:  469 INWRETLQFPDDVHLSPESEDLIRRLLTSSENRLGRIGGANEIKSHPFFRGVDWSSIREFNAPFVPKLSSITDT-SYFPTDELGDVSEYPQQSSRSD------RSSDLPFIGYTFSRFD 580          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: CBK1_YEAST (Serine/threonine-protein kinase CBK1 OS=Saccharomyces cerevisiae GN=CBK1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.226e-15
Identity = 45/139 (32.37%), Postives = 82/139 (58.99%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG-SEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVES---------------QTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFEAVKDKRS 369
            ++++  L+FP++  ++ EA+DLI RLL   + RLG  G +++IK+HP+F+ + W+ + ++EA Y P+++ + DT+ F   DE+E+               Q  K+ GS P++      +DL F+GYTY  F+ +  K +
Sbjct:  624 MNFEQTLQFPDDIHISYEAEDLIRRLLTHADQRLGRHGGADEIKSHPFFRGVDWNTIRQVEAPYIPKLSSITDTR-FFPTDELENVPDSPAMAQAAKQREQMTKQGGSAPVK------EDLPFIGYTYSRFDYLTRKNA 755          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: TRC_DROPS (Serine/threonine-protein kinase tricorner OS=Drosophila pseudoobscura pseudoobscura GN=trc PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.796e-15
Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTL-GSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFE 348
            ++W+  L FP E  ++ EAK+ I +  C+ + RLG+  G E +K+ P+F+ + W+ + E  AA   EV  + DT NF +F +V  + P    S P+ +     KD  F+ YTYK FE
Sbjct:  341 MNWRETLIFPPEIPISEEAKETIIKFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIP----SAPIPQGGEIAKDWVFINYTYKRFE 453          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: CBK1_CANGA (Serine/threonine-protein kinase CBK1 OS=Candida glabrata GN=CBK1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.796e-15
Identity = 44/136 (32.35%), Postives = 80/136 (58.82%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLG-SEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVES--QTPKRTGSGPMRKTML----------TPKDLSFVGYTYKNFEAVKDKRS 369
            ++++  L+FPE+  ++ EA+DLI RLL     RLG  G +++IK+HP+F+ + W+ + ++EA Y P+++ + DT+ F   DE+E+   +P    +   R+ M+            +DL F+GYTY  F+ +  K +
Sbjct:  638 MNFEQTLQFPEDVHISYEAEDLIRRLLTHSNQRLGRQGGADEIKSHPFFRGVDWNTIRQVEAPYIPKLSSITDTR-FFPTDELENVPDSPAMAQAAKQREQMMKNGVNPNQNQVKEDLPFIGYTYSRFDYLTRKNA 772          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: CBK1_ASHGO (Serine/threonine-protein kinase CBK1 OS=Ashbya gossypii GN=CBK1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.958e-15
Identity = 44/136 (32.35%), Postives = 77/136 (56.62%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVES--QTPKRTGSGPMRKTML-----------TPKDLSFVGYTYKNFEAVKDKRS 369
            ++++  L FP++  ++ EA+DLI RLL   + RLG  G+ +IK HP+F+ + W+ + ++ A Y P+++ V DT+ F   DE+E+   +P    +   R+ ML             +DL F+GYTY  F+ +  K +
Sbjct:  584 MNFEQTLVFPDDIHISYEAEDLIRRLLSHADERLGRHGANEIKNHPFFRGVDWETIRQVGAPYIPKLSSVTDTR-FFPTDELENVPDSPAMAQAAKQREQMLKQGGSAANTAQAKEDLPFIGYTYSRFDYLTRKNA 718          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: TRC_DROME (Serine/threonine-protein kinase tricorner OS=Drosophila melanogaster GN=trc PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.475e-15
Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTL-GSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFE 348
            ++W+  L FP E  ++ EAK+ I    C+ + RLG+  G E +K+ P+F+ + W+ + E  AA   EV  + DT NF +F +V  + P    S P+ +     KD  F+ YTYK FE
Sbjct:  346 MNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVSLEIP----SAPIPQGGEIAKDWVFINYTYKRFE 458          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: LATS2_HUMAN (Serine/threonine-protein kinase LATS2 OS=Homo sapiens GN=LATS2 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.475e-15
Identity = 40/120 (33.33%), Postives = 66/120 (55.00%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDK-LYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPK----DLSFVGYTYKNF 345
            ++W+N L  P + +L+PEA+DLI +L C  +HRLG  G++ +KAHP+F  I +   + +  A Y P ++  +DT NF   DE         GS     T+ +P     + +F  +T++ F
Sbjct:  926 INWENTLHIPAQVKLSPEARDLITKLCCSADHRLGRNGADDLKAHPFFSAIDFSSDIRKQPAPYVPTISHPMDTSNFDPVDEESPWNDASEGSTKAWDTLTSPNNKHPEHAFYEFTFRRF 1045          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: MRCKA_RAT (Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus GN=Cdc42bpa PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-14
Identity = 46/120 (38.33%), Postives = 63/120 (52.50%), Query Frame = 1
Query:   10 KNHLKFPEEAR-LTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGS-GPMRKTMLTPKDLSFVGYTYKNFEAVKDK 363
            K   +FP +   ++  AKDLI RL+C  EHRLG  G E  K HP+F  I WD +   EA Y PEV+   DT NF    +V+    K + +  P   T  +   L FVG+TY +   + D+
Sbjct:  298 KERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNF----DVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSSCVLSDR 413          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: MRCKA_MOUSE (Serine/threonine-protein kinase MRCK alpha OS=Mus musculus GN=Cdc42bpa PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-14
Identity = 46/120 (38.33%), Postives = 63/120 (52.50%), Query Frame = 1
Query:   10 KNHLKFPEEAR-LTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGS-GPMRKTMLTPKDLSFVGYTYKNFEAVKDK 363
            K   +FP +   ++  AKDLI RL+C  EHRLG  G E  K HP+F  I WD +   EA Y PEV+   DT NF    +V+    K + +  P   T  +   L FVG+TY +   + D+
Sbjct:  298 KERFQFPAQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNF----DVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSSCVLSDR 413          
The following BLAST results are available for this feature:
BLAST of CX289353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
CBK1_KLULA5.857e-1634.56Serine/threonine-protein kinase CBK1 OS=Kluyveromy... [more]
CBK1_YARLI1.704e-1533.61Serine/threonine-protein kinase CBK1 OS=Yarrowia l... [more]
CBK1_YEAST2.226e-1532.37Serine/threonine-protein kinase CBK1 OS=Saccharomy... [more]
TRC_DROPS3.796e-1535.90Serine/threonine-protein kinase tricorner OS=Droso... [more]
CBK1_CANGA3.796e-1532.35Serine/threonine-protein kinase CBK1 OS=Candida gl... [more]
CBK1_ASHGO4.958e-1532.35Serine/threonine-protein kinase CBK1 OS=Ashbya gos... [more]
TRC_DROME6.475e-1535.90Serine/threonine-protein kinase tricorner OS=Droso... [more]
LATS2_HUMAN6.475e-1533.33Serine/threonine-protein kinase LATS2 OS=Homo sapi... [more]
MRCKA_RAT1.443e-1438.33Serine/threonine-protein kinase MRCK alpha OS=Ratt... [more]
MRCKA_MOUSE1.443e-1438.33Serine/threonine-protein kinase MRCK alpha OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionC02012A08SK IF1 Citrus clementina cDNA clone C02012A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289353 ID=CX289353; Name=CX289353; organism=Citrus clementina; type=EST; length=370bp
GTGCATTGGAAAAATCACTTGAAGTTTCCGGAGGAGGCAAGATTGACGCC
TGAAGCAAAGGATCTTATTTGTAGGTTGCTTTGTGATGTTGAGCATAGGC
TTGGAACTCTTGGGTCTGAGCAAATTAAAGCTCATCCTTGGTTCAAAGAT
ATTGCATGGGACAAACTCTATGAAATGGAAGCAGCATATAAACCAGAGGT
CAATGGTGTACTCGATACCCAAAACTTCATGAAATTTGATGAGGTGGAGT
CCCAAACACCAAAAAGAACAGGATCTGGACCCATGAGGAAGACGATGTTA
ACTCCTAAAGATCTCAGTTTTGTTGGGTACACATATAAGAATTTTGAGGC
TGTCAAAGATAAAAGGAGTA
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