CX289487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX6_DICDI (Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 7.644e-43 Identity = 87/155 (56.13%), Postives = 115/155 (74.19%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDLEAI 457 G GKT + A A CSL F+SVKGPEL+N YIG SE+ +R+IF+KA A PC++FFDE DS+AP RG+ D+ GV DRVV+Q L ELDG++ + VF+ AT+RPDLLD++L+RPGRLDRLL+ S +E + IL+ ++RK LADDVDL + Sbjct: 962 GTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKV 1116
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 4.955e-42 Identity = 86/158 (54.43%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A M Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKM 678 HSP 2 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH 463 G GKT I A A F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL++ ++ + LADDVDLE +A+ Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 169.859 bits (429), Expect = 4.955e-42 Identity = 86/158 (54.43%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A M Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKM 678 HSP 2 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH 463 G GKT I A A F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL++ ++ + LADDVDLE +A+ Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 169.859 bits (429), Expect = 4.955e-42 Identity = 86/158 (54.43%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A M Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKM 678 HSP 2 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH 463 G GKT I A A F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL++ ++ + LADDVDLE +A+ Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 169.859 bits (429), Expect = 4.955e-42 Identity = 86/158 (54.43%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A M Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKM 678 HSP 2 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH 463 G GKT I A A F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL++ ++ + LADDVDLE +A+ Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 4.955e-42 Identity = 86/158 (54.43%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A M Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKM 678 HSP 2 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH 463 G GKT I A A F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL++ ++ + LADDVDLE +A+ Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 8.452e-42 Identity = 85/158 (53.80%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDL+ +A M Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKM 678 HSP 2 Score: 120.168 bits (300), Expect = 4.502e-27 Identity = 65/154 (42.21%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH 463 G GKT I A A F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL++ ++ + L+DDVDLE +A+ Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVAN 401
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 8.452e-42 Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ + VF+ AT+RPD++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVD++ +A M Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKM 678 HSP 2 Score: 120.168 bits (300), Expect = 4.502e-27 Identity = 65/154 (42.21%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH 463 G GKT I A A F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL++ ++ + L+DDVDLE +A+ Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVAN 401
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.459e-41 Identity = 83/154 (53.90%), Postives = 111/154 (72.08%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + FIS+KGPE+L+K++G SE+A+R+IF KA AP ++F DE DSIAP+RG ++GVT+R+VNQ LT LDG+EV+ GV V AT+RPD++D ALLR GR D+L++ P RL ILKV ++ +PLA DVDL IA Sbjct: 511 GVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIA 664 HSP 2 Score: 122.479 bits (306), Expect = 9.072e-28 Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPL 430 G GKT I A A F+S+ GPE+++KY G SEQ +R+IFSKA AP ++F DE DSIAPKR V RVV Q LT +DG++ V V AT+R D +D AL RPGR DR + P R +IL + +R +PL Sbjct: 234 GTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPL 376
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.459e-41 Identity = 84/158 (53.16%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LRPGRLD+L++ P + R+ ILK RK P++ DVDL+ +A M Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKM 678 HSP 2 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH 463 G GKT I A A F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL++ ++ + LADDVDLE +A+ Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVAN 401 The following BLAST results are available for this feature:
BLAST of CX289487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289487 ID=CX289487; Name=CX289487; organism=Citrus clementina; type=EST; length=468bpback to top |