CX289487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX6_YARLI (Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica GN=PEX6 PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 4.341e-38 Identity = 86/158 (54.43%), Postives = 107/158 (67.72%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVL--TGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD-ILKVISRKLPLADDVDLEAIA 460 G GKT + A A SL F SVKGPELLN YIG SE VR +F KA A PC++FFDE DS+AP+RG+ D+ GV DR+V+Q L ELDG+ GVFV AT+RPDLLD ALLRPGR D++L+ E+ I++ ++RK LA DV LEAI+ Sbjct: 762 GTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSVAPQRGNQGDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAIS 919
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: AFG2_SCHPO (ATPase family gene 2 protein OS=Schizosaccharomyces pombe GN=afg2 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 4.341e-38 Identity = 79/153 (51.63%), Postives = 105/153 (68.63%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 GC KT A A L FI+VKGPEL +K++G SE+AVR +F KA A+P ++FFDE D++ RG DN+ +DRVV L ELDG+E L V V AAT+RPD++D AL+RPGRLDRLL+ P+ R I+K+ + K+ A+DVDL+ IA Sbjct: 592 GCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNS--SDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIA 742 HSP 2 Score: 111.694 bits (278), Expect = 1.601e-24 Identity = 61/154 (39.61%), Postives = 90/154 (58.44%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLP-LADDVDLEAIA 460 G GKT ++ A AA + + ++ GP ++ KY+G +E +R IF A A P ++F DE D++APKR D + R V LT LDG+ V V AAT+RP+ +D AL RPGRL++ + P RLDI+K++ +P +D LE +A Sbjct: 323 GTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLA 476
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX6_DEBHA (Peroxisomal biogenesis factor 6 OS=Debaryomyces hansenii GN=PEX6 PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 1.263e-37 Identity = 88/161 (54.66%), Postives = 107/161 (66.46%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLT-----GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD-ILKVISRKLPLADDVDLEAIA 460 G GKT + A A SL F SVKGPELLN YIG SE VR +F KA A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ GVFV AT+RPDLLD ALLRPGR D++L+ E+ IL+ ++RK LAD+VDL IA Sbjct: 882 GTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIA 1042
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: SPAT5_MOUSE (Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 2.154e-37 Identity = 75/154 (48.70%), Postives = 107/154 (69.48%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN--TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAI 457 GC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A AP ++FFDE D++A +RG + V DRV+ Q LTE+DG+E L V V AAT+RPD +D AL+RPGR+DR+++ P R +IL + +P++++VDL+ + Sbjct: 671 GCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDEL 824 HSP 2 Score: 106.686 bits (265), Expect = 5.151e-23 Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLP 427 G GKT I A A + GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR + V RVV LT +DG+ E G V V AT+RP LDAAL RPGR D+ + P+ ++RLDIL+ + R++P Sbjct: 397 GTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVP 541
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX6_ASHGO (Peroxisomal biogenesis factor 6 OS=Ashbya gossypii GN=PEX6 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 3.675e-37 Identity = 84/157 (53.50%), Postives = 106/157 (67.52%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEV-LTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER-LDILKVISRKLPLADDVDLEAIA 460 G GKT + A A SL F SVKGPELLN YIG SE VR +F +A A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ G+FV AT+RPDLLD ALLRPGR D+LL+ E+ +IL+ ++RK L DV L+ +A Sbjct: 766 GTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLA 922
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: CD48C_ARATH (Cell division control protein 48 homolog C OS=Arabidopsis thaliana GN=CDC48C PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 3.675e-37 Identity = 77/153 (50.33%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 GCGKT I AAA F+ +KG ELLNKY+G SE A+R +F +A APC++FFDE D++ RG + V +R++NQFL ELDG E V+V AT+RPD++D A LRPGR LL+ P+ ER ILK I+RK P+ VDL+ IA Sbjct: 572 GCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIA 723 HSP 2 Score: 100.908 bits (250), Expect = 2.827e-21 Identity = 60/165 (36.36%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDG---------VEVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A + F + E+++ GASE+ +R++FSKA AP ++F DE D+I KR + + R+V Q LT +DG + G V V AT+RPD LD AL R GR + + P R +IL V+++KL L D + IA + Sbjct: 277 GCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARL 441
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX6_PENCH (Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 4.799e-37 Identity = 85/160 (53.12%), Postives = 108/160 (67.50%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV----EVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDF-PSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A SL F SVKGPELLN YIG SE VR +F +A A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ E GVFV AT+RPDLLD ALLRPGR D++L+ + R++ IL+ ++RK L DV L+ +A Sbjct: 1073 GTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVA 1232
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 8.186e-37 Identity = 83/156 (53.21%), Postives = 100/156 (64.10%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A S FISVKGPELL+ + G SE +RDIF KA AAAP ++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV AT+RPD +D A+LRPGRLD+L++ P RL IL RK PL ++L AIA Sbjct: 531 GTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIA 686 HSP 2 Score: 126.331 bits (316), Expect = 6.283e-29 Identity = 68/153 (44.44%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P RL++L++ ++ + LADDVDLEA+A Sbjct: 258 GTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALA 410
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX6_KLULA (Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis GN=PEX6 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.069e-36 Identity = 83/157 (52.87%), Postives = 108/157 (68.79%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEV-LTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDF-PSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A+ SL F SVKGPELLN YIG SE VR +F KA A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ GVFV AT+RPDLLD ALLRPGR D++L+ + +++ +I+K ++RK L +D+ IA Sbjct: 745 GTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDILDIA 901
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX6_CANGA (Peroxisomal biogenesis factor 6 OS=Candida glabrata GN=PEX6 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.069e-36 Identity = 80/156 (51.28%), Postives = 107/156 (68.59%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEV-LTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER-LDILKVISRKLPLADDVDLEAI 457 G GKT + A A SL F SVKGPELLN YIG SE VR +F KA A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ GVF+ AT+RPDLLD ALLRPGR D+L++ RE+ +I++ ++RK ++ D++ + + Sbjct: 761 GTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDEL 916 The following BLAST results are available for this feature:
BLAST of CX289487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289487 ID=CX289487; Name=CX289487; organism=Citrus clementina; type=EST; length=468bpback to top |