CX289487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.351e-30 Identity = 76/158 (48.10%), Postives = 95/158 (60.13%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 G GKT + A A FI V G EL+NK+IG + VR+IF A AP +LF DE D+IA KR G R + Q L ELDG + L V V AAT+R DL+D A+LRPGR DR++ PS R RL+IL + +RK +A DVDLEAIA + Sbjct: 183 GTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKL 340
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.351e-30 Identity = 68/156 (43.59%), Postives = 95/156 (60.90%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F S+ G E + ++G VRD+F +A A APC++F DE D++ +RG G D + +NQ LTE+DG E TG+ + AAT+RPD+LD+AL+RPGR DR + D P R +IL V +R L+ DVDL+ IA Sbjct: 204 GTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIA 359
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.682e-30 Identity = 69/157 (43.95%), Postives = 92/157 (58.60%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG----VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + FISV G + + ++G VRD+F A APC++F DE D++ RG G ++ +NQ L E+DG + G+ V AAT+RPD+LD ALLRPGR DR +F P R R +ILKV +R LA DVDLE +A Sbjct: 198 GVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVA 354
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.682e-30 Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F S+ G E + ++G VRD+F KA APCL+F DE D++ +RG G D + +NQ LTE+DG E TG+ + AAT+RPD+LD+AL+RPGR DR + D P R +IL+V +R LA +V +++IA Sbjct: 215 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIA 370
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 7.421e-30 Identity = 72/156 (46.15%), Postives = 92/156 (58.97%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F S E + ++G VRD+F KA A APC++F DE D++ +RG G D + +NQ LTE+DG +GV V AAT+RPD+LDAALLRPGR DR + D P R+ IL+V SR LA DVD E IA Sbjct: 275 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIA 430
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: CD48B_ARATH (Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 7.421e-30 Identity = 68/157 (43.31%), Postives = 98/157 (62.42%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG----VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 GC KT + AAA A F S+ EL + Y+G E +R+ F +A A+P ++FFDE D +A KRG +++ V +R+++ LTE+DG+E G+ V AAT+RP +DAAL+RPGR D +L+ P R +IL+V +R + L DDVDL IA Sbjct: 330 GCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIA 486 HSP 2 Score: 82.8037 bits (203), Expect = 7.966e-16 Identity = 55/161 (34.16%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA----PCLLFFDEFDSIAPKRGHDNTGVTD-RVVNQFLTELDGVEVLTG---VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT +V A C I + + + G SE+ +R+ F++A++ A P ++F DE D + P+R D D R+ +Q T +D + + V V A+T+R D +D AL R GR D L+ P+ +RL IL++ ++K+ L VDL+AIA Sbjct: 66 GTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR--DARREQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIA 224
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.653e-29 Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 G GKT + A A + FI V G EL+ K+IG V+DIF A AP ++F DE D+IA KR TG R + Q L E+DG + V + AT+RPD+LD A+LRPGR DR++ P + RL+ILK+ +RK+ LA+DV+LE IA M Sbjct: 214 GTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKM 371
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.653e-29 Identity = 70/156 (44.87%), Postives = 92/156 (58.97%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F S+ G E + ++G VRD+F KA APC++F DE D++ +RG G D + +NQ LTE+DG E TGV V AAT+R D+LD+ALLRPGR DR + D P + R DILKV + +DV LE IA Sbjct: 270 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIA 425
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.159e-29 Identity = 67/156 (42.95%), Postives = 92/156 (58.97%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F ++ G + + ++G VRD+F +A AAPC++F DE D++ +RG G D + +NQ L E+DG E G+ V AAT+RPD+LD ALLRPGR DR + P R R ILKV R++PLA D+D IA Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIA 350
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.159e-29 Identity = 67/156 (42.95%), Postives = 92/156 (58.97%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F ++ G + + ++G VRD+F +A AAPC++F DE D++ +RG G D + +NQ L E+DG E G+ V AAT+RPD+LD ALLRPGR DR + P R R ILKV R++PLA D+D IA Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIA 350 The following BLAST results are available for this feature:
BLAST of CX289487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289487 ID=CX289487; Name=CX289487; organism=Citrus clementina; type=EST; length=468bpback to top |