CX289487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 8.205e-29 Identity = 69/156 (44.23%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F S+ G E + ++G RD+F+KA A +PC++F DE D++ RG G D + +NQ LTE+DG TGV V AAT+RP++LD+ALLRPGR DR + P R R +ILKV SR L DV L IA Sbjct: 267 GTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIA 422
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.072e-28 Identity = 69/156 (44.23%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A F S E + ++G VRD+F KA + APC++F DE D++ +RG G D + +NQ LTE+DG +GV V AAT+RPD+LD+ALLRPGR DR + D P R+ IL+V SR LA DVD + IA Sbjct: 296 GTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIA 451
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.072e-28 Identity = 67/156 (42.95%), Postives = 92/156 (58.97%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F S+ G E + ++G VRD+F KA +PC++F DE D++ +RG G D + +NQ LTE+DG E TG+ + AAT+R D+LDAALLRPGR DR + D P + RL+IL V +R L + LE IA Sbjct: 216 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIA 371
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.828e-28 Identity = 69/157 (43.95%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH 463 G GKT + A A + F SV G E + +IG VRD+F KA+ APC++F DE D++ +RG G D + +NQ LTE+DG + GV V AT+R D+LDAALLRPGR DR + + P R+ ILKV +R PL +DV L +A+ Sbjct: 229 GTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLAN 385
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.828e-28 Identity = 66/156 (42.31%), Postives = 92/156 (58.97%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F ++ G + + ++G VRD+F A +APC++F DE D++ +RG G D + +NQ L E+DG + GV + AAT+RPD+LD ALLRPGR DR + P R R ILKV RK+PL++DVD IA Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIA 350
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.828e-28 Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F S+ G E + ++G VRD+F KA APCL+F DE D++ +RG G D + +NQ LTE+DG E +G+ V AAT+RPD+LD ALLRPGR DR + D+P + R IL + ++ L ++V L AIA Sbjct: 254 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIA 409
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.828e-28 Identity = 67/156 (42.95%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F S E + ++G VRD+F KA + APC++F DE D++ +RG G D + +NQ LTE+DG +GV V AAT+RPD+LD+ALLRPGR DR + D P R+ IL+V SR L DVD + +A Sbjct: 305 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVA 460
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.387e-28 Identity = 73/158 (46.20%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A + FI V G EL+ KYIG + V ++F A AP ++F DE D+I KR + TG +R + Q L E+DG + V V AAT+RPD+LD ALLRPGR DRL+ P RL+ILKV +R++ L VDL AIA M Sbjct: 184 GCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEM 340
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.118e-28 Identity = 67/156 (42.95%), Postives = 92/156 (58.97%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + FI V G EL+ KYIG + VR+IF A AP ++F DE DSIA +R ++ TG R + Q L E+DG + + + AAT+RPD+LD A+LRPGR DRL+ P R ILK+ K+ LA+D+D + +A Sbjct: 203 GTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLA 358
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.946e-28 Identity = 72/156 (46.15%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 GCGKT + A A + FI V G EL+ K+IG + V ++F A AP ++F DE D+I KR + TG +R + Q L E+DG + V V AAT+RPD+LD ALLRPGR DRL+ P R RL+ILKV +RK+ L +VDL IA Sbjct: 182 GCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNLR-NVDLSIIA 336 The following BLAST results are available for this feature:
BLAST of CX289487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289487 ID=CX289487; Name=CX289487; organism=Citrus clementina; type=EST; length=468bpback to top |