CX289487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.946e-28 Identity = 65/156 (41.67%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A ++ FI+V G E L ++G VRD+F+ A APC+LF DE D++ KRG N G + +NQ L E+DG T V + A T+RPD+LD AL+RPGR DR +F P + R I KV R L L ++ E +A Sbjct: 352 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLA 507
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 9.072e-28 Identity = 65/156 (41.67%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A ++ FI+V G E L ++G VRD+F+ A APC+LF DE D++ KRG N G + +NQ L E+DG T V + A T+RPD+LD ALLRPGR DR +F P + R I KV R L L ++ + +A Sbjct: 351 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLA 506
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.185e-27 Identity = 69/156 (44.23%), Postives = 90/156 (57.69%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A FI + G EL+ KYIG + VR++F A +P ++F DE DSI KR T R + Q L E+DG + V + AAT+RPD+LD ALLRPGR DR++ P+ R ILK+ +RK+ LADDVDL IA Sbjct: 203 GTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIA 358
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.185e-27 Identity = 71/158 (44.94%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A + FI V G EL+ KYIG + V ++F A AP ++F DE D+I KR + TG +R + Q L E+DG + V V AAT+RPD+LD ALLRPGR DRL+ P RL+ILKV +R++ L +VDL IA + Sbjct: 184 GCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEI 340
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.185e-27 Identity = 67/156 (42.95%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + FI V G EL+ KYIG + VR+IF A AP ++F DE DSIA +R ++ TG R + Q L E+DG + + + AAT+RPD+LD A+LRPGR DRL+ P R ILK+ K+ LA D+D + +A Sbjct: 203 GTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLA 358
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.185e-27 Identity = 65/156 (41.67%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A ++ FI+V G E L ++G VRD+F+ A APC+LF DE D++ KRG N G + +NQ L E+DG T V + A T+RPD+LD ALLRPGR DR +F P + R I KV R L L ++ + +A Sbjct: 350 GTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLA 505
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.547e-27 Identity = 63/156 (40.38%), Postives = 90/156 (57.69%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F S+ G + + ++G VRD+F A APC++F DE D++ +RG G D + +NQ L E+DG G+ + AAT+R D+LD ALLRPGR DR + + P R ++LKV +R PL DDV+L+ IA Sbjct: 209 GTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIA 364
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: SPA5L_BOVIN (Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 71/186 (38.17%), Postives = 98/186 (52.69%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT--GVTDRVVNQFLTELDGVEVLT-------------------------------GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 GC KT +V A A +C F+SV G +L + ++G SE+ + +F +A A P ++F DE DSI R T V DRV++ L ELDGV + T V V AAT+RPD+LD ALLRPGRLD++++ P + RL ILKV ++ P+ DV LE +A Sbjct: 510 GCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVA 695 HSP 2 Score: 113.62 bits (283), Expect = 4.214e-25 Identity = 67/158 (42.41%), Postives = 89/158 (56.33%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA---PCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 G GKT +V A A ++V P L G +E+ VR IF +A A P LLF DE D++ P+RG + RVV Q LT LDG+ V V +T+RPD LD AL RPGR DR + P+ R+R IL+VI+ K+P++ VDL +A M Sbjct: 244 GVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEM 401
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 71/158 (44.94%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A + FI V G EL+ K+IG + V ++F A AP ++F DE D+I KR + TG +R + Q L E+DG + V V AAT+RPD+LD ALLRPGR DRL+ P + RL+ILKV +RK+ L VDL IA + Sbjct: 182 GCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNL-KGVDLRVIAEI 338
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 2.021e-27 Identity = 64/156 (41.03%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A + F ++ G + + ++G VRD+F + +APC++F DE D++ +RG G D + +NQ L E+DG + G+ + AAT+RPD+LD ALLRPGR DR + P R R ILKV RK+PL+ DVD IA Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIA 350 The following BLAST results are available for this feature:
BLAST of CX289487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289487 ID=CX289487; Name=CX289487; organism=Citrus clementina; type=EST; length=468bpback to top |