CX289492
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_RAT (Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus GN=Eif3h PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.057e-25 Identity = 59/153 (38.56%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EE+P+ + NS LI+ M ELE + V + ++ L L+SS L +N++ L++ +D++S + K+ Y R+ ++QQ Q+ + Q+R+ EN R++ GE PLPEED S +FKP P R++S LIA +I YC I T Q+ +L++ +AL + Sbjct: 199 EEVPIVIKNSHLINVLMWELEKKSAVADK-HELLSLASSNHLGKNLQLLMDRVDEMSQDIIKYNTYMRNSSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSK-LFKPHQAPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQE 349
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_MOUSE (Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus GN=Eif3h PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.984e-25 Identity = 58/153 (37.91%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EE+P+ + NS LI+ M ELE + V + ++ L L+SS L ++++ L++ +D++S + K+ Y R+ ++QQ Q+ + Q+R+ EN R++ GE PLPEED S +FKP P R++S LIA +I YC I T Q+ +L++ +AL + Sbjct: 199 EEVPIVIKNSHLINVLMWELEKKSAVADK-HELLSLASSNHLGKSLQLLMDRVDEMSQDIIKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSK-LFKPHQAPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQE 349
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_BOVIN (Eukaryotic translation initiation factor 3 subunit H OS=Bos taurus GN=EIF3H PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.984e-25 Identity = 58/153 (37.91%), Postives = 96/153 (62.75%), Query Frame = 1 Query: 1 EEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EE+P+ + NS LI+ M ELE + V + ++ L L+SS L + ++ L++ +D++S + K+ Y R+ ++QQ Q+ + Q+R+ EN R++ GE PLPEED S +FKP P R++S LIA +I YC I T Q+ +L++ +AL + Sbjct: 199 EEVPIVIKNSHLINVLMWELEKKSAVADK-HELLSLASSNHLGKTLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSK-LFKPHQPPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQE 349
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_BOMMO (Eukaryotic translation initiation factor 3 subunit H OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.128e-22 Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 E+P+ + NS L + ++EL P + L L ++ LE + L+E +D+L+ E KF Y + + RQQ + W+ KR EN AR A E PLPEED N +FKP P PPRL ++A +I Y I+ QS ++LYLT+AL + Sbjct: 180 EVPIVIRNSPLTNIMISELTEMIP-EEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKFNRYQQLVVRQQQDKHRWMVKRAQENAARAAKDETPLPEEDV-NKLFKPHPVPPRLNPMIVAGQIDTYSQHISQFCSQSLAKLYLTQALQN 329
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_ANOGA (Eukaryotic translation initiation factor 3 subunit H OS=Anopheles gambiae GN=AGAP009204 PE=3 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 3.398e-20 Identity = 53/152 (34.87%), Postives = 89/152 (58.55%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EIP+ + NSAL + M+EL P + + L L ++ LE ++ +++ +D+L+ E KF Y ++ RQ+ ++ L K EN AR A GE+ +PEE+ N +F+PIP P RL +++ +I Y I+ QS ++LY+T+AL + Sbjct: 179 EIPIVIKNSALCNIMMSELTELVPEEEGTHF-LDLGTASVLENHLRCMMDRVDELNHEATKFNKYQQAAIRQEQEKHRMLAKHAQENAARIAKGEQAVPEEEV-NKLFRPIPVPTRLNPMIVSGQINTYAQHISQFCSQSLAKLYMTQALQN 328
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_NEOFI (Eukaryotic translation initiation factor 3 subunit H OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_015650 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.438e-20 Identity = 57/170 (33.53%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELE-PDTP---------------------VTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTK 447 E+PV++ NS LI++F+ +L+ P+ P + +YD L LS PFLE+N + L++ ++ E FQ+Y RSL R+Q + +W QKR+ EN A +AA ++PL ED +FK EP RLES L + ++ Y QI+ + +++ K Sbjct: 169 ELPVEIHNSHLITSFIHQLQTPNIPAPTDLPPSLAALESGPFVKSSILAPNYDNLTLSIDPFLEKNCDLLLDSIETHHTETNNFQYYQRSLAREQQRISAWQQKRKQEN-ATRAALKQPLLPEDEWQRLFKLPQEPSRLESMLNSRQVDQYARQIDSFVSSTTGKMFAVK 337
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPTN (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_00190 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELE-------PDTP---------------VTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTK 447 E+PV++ NS LI+ F+ +L+ D P + +YD L LS PFLE+N + L++ ++ + E FQ+Y RS TR+Q + W+ KR+ EN +R + PLP ED +FK EP RLES L + ++ Y Q++ + +++ K Sbjct: 187 ELPVEIHNSHLITTFLHQLQCPRQSAPTDLPPSLAALESGPFVKDTILAPNYDNLSLSIDPFLEKNCDLLLDSIETHNTETNNFQYYQRSFTREQTKINQWIAKRKAENASRATLKQPPLP-EDEWQRLFKLPQEPSRLESMLNSRQVEQYARQVDSFVSATTGKMFAVK 355
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPNC (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An08g01790 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20 Identity = 55/170 (32.35%), Postives = 89/170 (52.35%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELEPDTPVTQRD----------------------YDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTK 447 E+PV++ NS LI++F+ +L+ T T D +D L LS PFLE+N + L++ ++ E FQ+Y RSL R+QA+ +W KR+ EN A +AA ++PL ED +FK EP RL+S L + ++ Y Q++ + +++ K Sbjct: 187 ELPVEIHNSHLITSFIHQLQTPTQATPSDLPPSLAALESSQYAKSSVLAPNFDNLSLSIDPFLEKNCDLLLDSIEVHHTETNNFQYYQRSLAREQAKITAWQNKRKTEN-ASRAALKQPLLPEDEWQRLFKLPQEPSRLDSMLNSRQVEQYARQVDSFVSATTGKMFAVK 355
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPFU (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus fumigatus GN=AFUA_1G09970 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19 Identity = 56/170 (32.94%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELE-PDTP---------------------VTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTK 447 E+PV++ NS LI++F+ +L+ P+ P + ++D L LS PFLE+N + L++ ++ E FQ+Y RSL R+Q + +W QKR+ EN A +AA ++PL ED +FK EP RLES L + ++ Y QI+ + +++ K Sbjct: 187 ELPVEIHNSHLITSFIHQLQTPNIPAPTELPSSLAALESGPFVKSSILAPNFDNLALSIDPFLEKNCDLLLDSIETHHTETNNFQYYQRSLAREQQRISAWQQKRKQEN-ATRAALKQPLLPEDEWQRLFKLPQEPSRLESMLNSRQVDQYARQIDSFVSSTTGKMFAVK 355
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPFC (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_009410 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19 Identity = 56/170 (32.94%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELE-PDTP---------------------VTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTK 447 E+PV++ NS LI++F+ +L+ P+ P + ++D L LS PFLE+N + L++ ++ E FQ+Y RSL R+Q + +W QKR+ EN A +AA ++PL ED +FK EP RLES L + ++ Y QI+ + +++ K Sbjct: 187 ELPVEIHNSHLITSFIHQLQTPNIPAPTELPSSLAALESGPFVKSSILAPNFDNLALSIDPFLEKNCDLLLDSIETHHTETNNFQYYQRSLAREQQRISAWQQKRKQEN-ATRAALKQPLLPEDEWQRLFKLPQEPSRLESMLNSRQVDQYARQIDSFVSSTTGKMFAVK 355 The following BLAST results are available for this feature:
BLAST of CX289492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289492 ID=CX289492; Name=CX289492; organism=Citrus clementina; type=EST; length=537bpback to top |