CX289492
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_DROER (Eukaryotic translation initiation factor 3 subunit H OS=Drosophila erecta GN=eIF-3p40 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.080e-13 Identity = 45/152 (29.61%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EIP+ + NS L + M+EL P + ++ L L ++ LE M LIE +D+L E ++ Y + + +Q ++ L K EN R + GE +PEE+ F+P+ P RL + + + +I + I QS ++L++T++L + Sbjct: 181 EIPIVIKNSPLTNIMMSELNELLP-EDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQVVFKQDTEKHRALAKLAAENAVRTSKGEPTVPEEEVIKQ-FRPMTAPNRLTATITSGQINTHAQHIAQFCSQSLAKLFITESLQN 330
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_DROPS (Eukaryotic translation initiation factor 3 subunit H OS=Drosophila pseudoobscura pseudoobscura GN=eIF-3p40 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.023e-13 Identity = 45/152 (29.61%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EIP+ + NS L + M+EL P + ++ L L ++ LE +M LIE +D+L E ++ Y + + +Q + + L K EN R + GE + EE+ F+P+P P RL + + + +I + I QS ++L++T++L + Sbjct: 180 EIPIVIKNSPLTNIMMSELNELLP-EDKGHNFLDLGTASVLENHMRSLIERVDELYQEAVRYNKYQQVVFKQDSDKNRALAKLAAENAVRTSKGEPTVAEEEVIKQ-FRPMPVPARLTATITSGQINTHSQHIAQFCSQSLAKLFITESLQN 329
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_DROME (Eukaryotic translation initiation factor 3 subunit H OS=Drosophila melanogaster GN=eIF-3p40 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 4.023e-13 Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKAL 453 EIP+ + NS L + M+EL P + ++ L L ++ LE M LIE +D+L E ++ Y + + +Q ++ L K EN R + GE +PEE+ F+P+ P RL + + + +I + I QS ++L++T++L Sbjct: 181 EIPIVIKNSPLTNIMMSELNELLP-EDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQVVFKQDTEKHRALAKLAAENAVRTSKGEPTVPEEEVIKQ-FRPMTAPNRLTATITSGQINTHAQHIAQFCSQSLAKLFITESL 328
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_USTMA (Eukaryotic translation initiation factor 3 subunit H OS=Ustilago maydis GN=UM00199 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.862e-13 Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTEL--------------------EPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRI 381 EIPV + N+AL+ AF++ + P + Y L L+ P L ++E +E MD+ + E F R L R++A+ ++L +++ EN AR+A G PLP ED N +FK EP RLE+ L+ +I Sbjct: 233 EIPVSLRNTALLDAFLSSISTPSAPGPSIVQPSTSDLLRNPPSAALAPSYTSLNLALEPVLASSLESTLEIMDEHAAEAGNVGFQARQLAREKAKADAYLARKKAENAAREAQGLAPLPIED-VNRLFKIPAEPSRLEATLLLGQI 377
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_DROSE (Eukaryotic translation initiation factor 3 subunit H OS=Drosophila sechellia GN=eIF-3p40 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.962e-13 Identity = 44/150 (29.33%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKAL 453 EIP+ + NS L + M+EL P + ++ L L ++ LE M LIE +D+L E ++ Y + + +Q ++ L K EN R + GE +PE++ F+P+ P RL + + + +I + I QS ++L++T++L Sbjct: 181 EIPIVIKNSPLTNIMMSELNELLP-EDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQVVFKQDTEKHRALAKLAAENAVRTSKGEPTVPEDEVIKQ-FRPMTAPNRLTATITSGQINTHAQHIAQFCSQSLAKLFITESL 328
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_DROYA (Eukaryotic translation initiation factor 3 subunit H OS=Drosophila yakuba GN=eIF-3p40 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.608e-12 Identity = 44/152 (28.95%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQINGVTGQSFSRLYLTKALHD 459 EIP+ + NS L + M+EL P + ++ L L ++ LE M LIE +D+L E ++ Y + + +Q ++ L K EN R + GE + EE+ F+P+ P RL + + + +I + I QS ++L++T++L + Sbjct: 181 EIPIVIKNSPLTNIMMSELNELLP-EDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQVVFKQDTEKHRALAKLAAENAVRTSKGEPTVAEEEVIKQ-FRPMTAPNRLTATITSGQINTHAQHIAQFCSQSLAKLFITESLQN 330
BLAST of CX289492 vs. ExPASy Swiss-Prot
Match: EIF3H_SCHPO (Eukaryotic translation initiation factor 3 subunit H OS=Schizosaccharomyces pombe GN=eif3h PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.448e-12 Identity = 46/144 (31.94%), Postives = 70/144 (48.61%), Query Frame = 1 Query: 4 EIPVKVSNSALISAFMTEL-EPDTPVTQ-----------------RDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRI 381 E+P+ + NS L + + L EP TP + + ++S +N+E L+E D+ EQ F+ R L R+QA+ Q W+ KR+ EN R A +PLP +D IFK EP L+S LI+++I Sbjct: 189 ELPIVIHNSHLATCLLHSLSEPPTPASTLTAEAALEDCESNLPLTETFSNFEVSLGTRYRKNIELLLESTDEFHYEQGNLGFHQRQLAREQAKIQQWIAKRKAENANRAAENLQPLPLDDWKR-IFKLPAEPRLLDSLLISSQI 331 The following BLAST results are available for this feature:
BLAST of CX289492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289492 ID=CX289492; Name=CX289492; organism=Citrus clementina; type=EST; length=537bpback to top |