CX289498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289498 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 4.779e-50 Identity = 86/132 (65.15%), Postives = 103/132 (78.03%), Query Frame = 1 Query: 1 IKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYK--GNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPK 390 IKWD+M WTPDGY AVVT+ N+QQ+RHIQ PGW LGWTW +KEVIWSM G Q EQGDCS K N+PH CKK PTVVDLLPG P + QI NCCK G +S+++QDP + +SFQ+ VG +G +N+TVRVPK Sbjct: 39 IKWDVMQWTPDGYAAVVTLSNYQQFRHIQPPGWQLGWTWQQKEVIWSMYGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPANSAASFQIIVGHSGNSNETVRVPK 170
BLAST of CX289498 vs. ExPASy Swiss-Prot
Match: COBL5_ARATH (COBRA-like protein 5 OS=Arabidopsis thaliana GN=COBL5 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.067e-41 Identity = 76/129 (58.91%), Postives = 97/129 (75.19%), Query Frame = 1 Query: 1 IKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVP 387 +KWD+++WTPDGYVAVVT +N+Q+ R I PGW + W KKEVIW+M+G +TT QG CS +KGNIP C + PTVVDLLPGTP+NQQI NCCK GV+ ++ S+FQLSVG+AG + KT R+P Sbjct: 34 VKWDLLNWTPDGYVAVVTAYNYQKQRSI--PGWKMSWRGTKKEVIWNMLGAKTTGQGGCSMFKGNIPQSCVRKPTVVDLLPGTPFNQQIANCCKSGVLKPGSE------SAFQLSVGSAGNSVKTARMP 154
BLAST of CX289498 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 7.407e-35 Identity = 60/121 (49.59%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 1 IKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKY--KGNIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVGAA 357 IKWD++ +P + VT+ N Q+YRH++ PGW L W W +EVIW M G +TTEQG+CS + GN+PHCC + PT+VDLLPG N Q+ NCC+GGV++S +QD +S+F ++VG++ Sbjct: 47 IKWDLLLSSPGQHHVQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSS 167
BLAST of CX289498 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 2.383e-33 Identity = 60/118 (50.85%), Postives = 80/118 (67.80%), Query Frame = 1 Query: 1 IKWDIMSWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKYKG-NIPHCCKKDPTVVDLLPGTPYNQQIENCCKGGVISSWAQDPTTALSSFQLSVG 351 I WD S + Y +V++ N Q YRHI+ PGW L W WA E+IW M G + TEQGDC + +G PHCC+K P +VDL PGTPYN Q+ +CC+GGV+SS Q+ T+ ++FQ+ VG Sbjct: 34 INWDFQS-IENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVG 150 The following BLAST results are available for this feature:
BLAST of CX289498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289498 ID=CX289498; Name=CX289498; organism=Citrus clementina; type=EST; length=390bpback to top |