CX289574

Overview
NameCX289574
Unique NameCX289574
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length487
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_SULIK (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=fusA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.334e-22
Identity = 53/136 (38.97%), Postives = 79/136 (58.09%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHW 418
            GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W
Sbjct:  570 GFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRW 703          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_SULIA (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.27) GN=fusA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.334e-22
Identity = 53/136 (38.97%), Postives = 79/136 (58.09%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHW 418
            GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W
Sbjct:  570 GFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRW 703          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_DESK1 (Elongation factor 2 OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=fusA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.857e-21
Identity = 54/136 (39.71%), Postives = 79/136 (58.09%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHW 418
            GF+ A +EG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTA+P +LEP+  ++I++P + +G I SV+ +KRG + E  Q   T    + A +PV ESF  +  LR  T+G+A     F  W
Sbjct:  569 GFRLAMREGPLAMEPVRGVKVVLHDAVIHEDPAHRGPAQIFPAVRNAIFAGFLTARPTILEPILKLDIRSPMEYIGNISSVITKKRGKLIEVQQMETTA--RVIAEIPVSESFDIADMLRNVTAGKAIWGQEFSRW 702          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_ENCCU (Elongation factor 2 OS=Encephalitozoon cuniculi GN=EFT1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.425e-21
Identity = 59/159 (37.11%), Postives = 84/159 (52.83%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            GF+ A  +G L  E MRG+ FE+ D VLHADAIHRG  Q++   + +     L A P L EP+Y VEI  P    G + ++L  KRG   +    PG     I   LPV ESF F+  L++ + G+A     F H+ ++  +  +P S   + V  +RK
Sbjct:  674 GFRAAVNDGPLIGEVMRGLKFELKDAVLHADAIHRGINQLLQPVKNLCKGLLLAAGPILYEPIYEVEITTPNDYSGAVTTILLSKRGTAEDFKTLPGNDTTMITGTLPVKESFTFNEDLKSGSRGKAGASMRFSHYSILPGNLEDPNSLMFKTVEAVRK 832          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_DESMO (Elongation factor 2 OS=Desulfurococcus mobilis GN=fusA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21
Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIR 484
            GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTAKP +LEP+  ++I+ P + +G I +V+ +KRG + E  Q   +    + A +PV ESF  +  LR  T+G+A     F  W  +      P S    LV  IR
Sbjct:  567 GFRLAMKEGPLAMEPVRGVKVVLHDAVVHEDPAHRGPAQIFPAVRNAIFAGFLTAKPTILEPILKLDIRTPMEYIGNISTVITKKRGKLIEVQQMETSA--RVIAEIPVSESFDIADMLRNVTAGKAIWGQEFSRWAPV------PESMLMDLVSKIR 716          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.136e-21
Identity = 58/159 (36.48%), Postives = 92/159 (57.86%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            G++ A +EG LA E +RG+   + D  +H D  HRG  Q+ P  R  I+A+ L +KP LLEP+  ++I+ P + +G + +VL++KRG V   M + G+ +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S  + ++L IR+
Sbjct:  570 GYRLAMREGPLAHEPIRGVKVILHDATIHEDPAHRGPAQIYPAVRNAIFAAMLMSKPTLLEPLQKLDIRVPMEFVGNVTAVLSRKRGKVL-NMTQSGS-VARILAEIPVSESYELASDLRGSTGGRAFWGTEFSKWAPV------PDSILTDVILKIRE 720          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METTP (Elongation factor 2 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=fusA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.055e-21
Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQA 391
            GF+ A   G +  E ++GI  ++ DV LH DA+HRG  QVIP  R+ + A  L A P LLEP+  V IQ P+  +GG  S +  +RG V   M+  G  +  IKA +PV E FGF+  +R+AT G+A
Sbjct:  563 GFEEAITAGPICREPVQGIKAKLVDVKLHEDAVHRGPAQVIPAVRQAVQAGILMANPTLLEPMQYVFIQVPQDQMGGAMSEIQGRRG-VILSMETEG-DMITIKAKMPVAEMFGFAGAIRSATEGRA 687          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_IGNH4 (Elongation factor 2 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=fusA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.055e-21
Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWD 421
            AG++ A KEG LA+E +RG+   + D V+H D  HRG  Q+ P  R  +YAS LT  P LLEP   ++I+ P + +G +  V+ + RG + E +   G     I A +P+ ESF     LR+ T+G+AF    F  W+
Sbjct:  572 AGWRLAMKEGPLAKEPVRGVKVILWDAVIHEDPAHRGPAQLYPAVRNAVYASMLTDSPTLLEPWQKLDIRVPNEYIGAVTGVITKHRGKILEVIDMGGQA--RIVAAVPIAESFELPMELRSVTAGRAFWGTEFYGWE 707          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.573e-20
Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQA 391
            GF+ A +EG LA+E  RG+   + D  +H D +HRG  QVIP  +R IY   L A   LLEP+  + +  P+  +G +   +  +RG + EE+Q+ G  +  IK   PV E FGF++ +R+AT G+A
Sbjct: 1087 GFEEAMEEGPLAKEPCRGVKVSLVDAEIHEDPVHRGPAQVIPAIKRAIYGGMLLADTHLLEPMQYIYVTVPQDYMGAVTKEIQGRRGTI-EEIQQEGDTVI-IKGKAPVAEMFGFANDIRSATEGRA 1211          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.331e-19
Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            GF+ A + G LA E  +G+  ++ D VLH DAIHRG  Q+IP AR  I  + + A P LLEP+  V I  P+  +G     ++ +RG +  +M++ G  +  IKA  PV E FGF+  +R AT G+      F  ++ +  D  E      QL+  IR+
Sbjct:  569 GFKEAMRNGPLAAEKCQGVKVKLMDAVLHEDAIHRGPAQMIPAARFGIRDAMMQANPVLLEPMQFVYINTPQDFMGAAMREISNRRGQIL-DMEQEG-DMAIIKAKCPVAEMFGFAGAIRGATQGRCLWSIEFAGYEKVPRDMQE------QLIKQIRE 719          
The following BLAST results are available for this feature:
BLAST of CX289574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
EF2_SULIK8.334e-2238.97Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIA8.334e-2238.97Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_DESK11.857e-2139.71Elongation factor 2 OS=Desulfurococcus kamchatkens... [more]
EF2_ENCCU2.425e-2137.11Elongation factor 2 OS=Encephalitozoon cuniculi GN... [more]
EF2_DESMO3.167e-2137.97Elongation factor 2 OS=Desulfurococcus mobilis GN=... [more]
EF2_METS54.136e-2136.48Elongation factor 2 OS=Metallosphaera sedula (stra... [more]
EF2_METTP7.055e-2143.31Elongation factor 2 OS=Methanosaeta thermophila (s... [more]
EF2_IGNH47.055e-2138.41Elongation factor 2 OS=Ignicoccus hospitalis (stra... [more]
EF2_METKA4.573e-2039.37Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]
EF2_METJA1.331e-1936.48Elongation factor 2 OS=Methanocaldococcus jannasch... [more]

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Properties
Property NameValue
Genbank descriptionC02014G11SK IF1 Citrus clementina cDNA clone C02014G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289574 ID=CX289574; Name=CX289574; organism=Citrus clementina; type=EST; length=487bp
GCACGAGGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAG
AAAACATGAGGGGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCC
GATGCTATCCACAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGT
CATTTATGCATCCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCT
ACTTGGTGGAAATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGT
GTTCTTAACCAGAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGG
TACCCCACTTTATAACATCAAGGCATACCTCCCGGTCGTTGAGTCTTTTG
GATTTTCCAGCACTTTGAGAGCTGCAACCTCTGGACAGGCATTCCCTCAA
TGTGTGTTTGATCACTGGGACATGATGTCATCTGATCCATTGGAGCCGGG
ATCCCAGGCTTCACAACTTGTTTTGGATATTAGGAAG
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