CX289574

Overview
NameCX289574
Unique NameCX289574
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length487
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METAC (Elongation factor 2 OS=Methanosarcina acetivorans GN=fusA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.590e-18
Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPL 442
            GF+   + G L  E +  +   + D  LH DAIHRG  Q+IP AR+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG +   M   G  L  I+A +PV E FGF+  +R+AT G+A     F  +D++ S  L
Sbjct:  563 GFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPAARQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG-IILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDVVPSSIL 704          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18
Identity = 58/159 (36.48%), Postives = 84/159 (52.83%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            GF+   + G L  E +  +   + D  LH DAIHRG  Q+IP +R+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG V   M   G  L  I+A +PV E FGF+  +R+AT G+A     F  +D++      P S  +++V  IR+
Sbjct:  563 GFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPASRQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG-VILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDVV------PSSILTEIVGQIRE 713          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METM5 (Elongation factor 2 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=fusA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18
Identity = 53/158 (33.54%), Postives = 83/158 (52.53%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIR 484
            GF+   + G LA E ++G+  ++ D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG +  +M++ G  +  IK+ +PV E FGF+  +R AT G+      F  ++ +      PG    ++V  IR
Sbjct:  570 GFKEGVRNGPLAAEKVQGVKIKLMDATFHEDAIHRGPAQIIPAVRFGVRDAVSQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFEKV------PGELQPKIVKQIR 719          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18
Identity = 57/159 (35.85%), Postives = 81/159 (50.94%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            G   A   G LA+E ++ +   + DV LH DAIHRG  QVIP  R  I    L A   LLEPV  ++I  P   +G   S +  +RG VF +MQ  G  +  +    PV E FGF+  +R+AT G+A     F  ++++      P +    +V+ IRK
Sbjct:  564 GINEALAGGPLADEPVQNLKMTLTDVKLHEDAIHRGPAQVIPAVRGAIKGGMLIAGDSLLEPVQKIQISVPMDQMGAATSQIQGRRGQVF-DMQSEGDTI-TVVGKAPVAELFGFAGDIRSATEGRAMWNTEFAGFELV------PNNLVKDVVVAIRK 714          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.245e-17
Identity = 42/126 (33.33%), Postives = 73/126 (57.94%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQ 388
            GF+ A   G +A+E + G+  ++ D  +H DA+HRG  QV+P  R+ I+ + ++A+P LLEP+  V I  P+  +G     +  +RG +    Q     +  +++ +PV E FGF+  +R+AT G+
Sbjct:  564 GFESAMDNGPVAKEKVMGVKIKLMDAKIHEDAVHRGPAQVLPAIRKGIFGAMMSAEPVLLEPIQKVFINVPQDYMGSATREIQNRRGQIVNMTQE--GDMVTVESTVPVAEMFGFAGDIRSATEGR 687          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.627e-17
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 2
Query:   35 GALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQ 388
            G LA E + G+   + D  LH D+IHRG  QVIP  R  IY +   AK  LLEPV  V I  P++ +G   + + Q+RG + E+M++ G  + ++ A +PV   FGF+S +R AT G+
Sbjct:  573 GPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAKRVLLEPVQRVFINVPQEEMGAAINEIQQRRG-IIEDMKQEGDEI-SLTAKVPVAGMFGFASAIRGATGGK 688          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METTE (Elongation factor 2 OS=Methanosarcina thermophila GN=fusA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.627e-17
Identity = 59/159 (37.11%), Postives = 84/159 (52.83%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            GF+   + G L  E +  +   + D  LH DAIHRG  QVIP AR+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG +   M   G  L  I+A +PV E FGF+  +R+AT G+A     F  +D++      P S  +++V  IR+
Sbjct:  563 GFEEVMRAGPLTREPVANMKCVLVDAKLHEDAIHRGPAQVIPAARQAIQAGMLMAEDCLLEPYQKVFVQVPQLTMGGATKELQGRRG-IILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDIV------PTSIQTEVVGQIRE 713          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17
Identity = 51/125 (40.80%), Postives = 72/125 (57.60%), Query Frame = 2
Query:   14 FQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQ 388
            F  A  +G LA E + G+   + D  LH D+IHRG  QVIP  R  IY +   A   LLEP+  V I  P++ +G + + L Q+RG V E+MQ+ G  +  I A +PV    GF+S +R+AT G+
Sbjct:  566 FNEAMDKGPLANEKVYGLKVSLMDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAGRVLLEPMQKVFISVPQEIMGSVTNELQQRRG-VVEDMQQNGEEI-TIIAKVPVAGMIGFASAIRSATGGK 688          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17
Identity = 50/146 (34.25%), Postives = 80/146 (54.79%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEP 448
            GF+   + G LA E ++G+   + D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG +  +M++ G  +  IK+ +PV E FGF+  +R AT G+      F  ++ + ++ L+P
Sbjct:  570 GFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPNE-LQP 712          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17
Identity = 50/146 (34.25%), Postives = 80/146 (54.79%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEP 448
            GF+   + G LA E ++G+   + D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG +  +M++ G  +  IK+ +PV E FGF+  +R AT G+      F  ++ + ++ L+P
Sbjct:  570 GFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPAE-LQP 712          
The following BLAST results are available for this feature:
BLAST of CX289574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
EF2_METAC5.590e-1838.19Elongation factor 2 OS=Methanosarcina acetivorans ... [more]
EF2_METMA7.301e-1836.48Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_METM59.536e-1833.54Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METB69.536e-1835.85Elongation factor 2 OS=Methanoregula boonei (strai... [more]
EF2_METTH1.245e-1733.33Elongation factor 2 OS=Methanobacterium thermoauto... [more]
EF2_THEAC1.627e-1740.68Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_METTE1.627e-1737.11Elongation factor 2 OS=Methanosarcina thermophila ... [more]
EF2_PICTO2.124e-1740.80Elongation factor 2 OS=Picrophilus torridus GN=fus... [more]
EF2_METMP2.124e-1734.25Elongation factor 2 OS=Methanococcus maripaludis G... [more]
EF2_METM72.124e-1734.25Elongation factor 2 OS=Methanococcus maripaludis (... [more]

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Properties
Property NameValue
Genbank descriptionC02014G11SK IF1 Citrus clementina cDNA clone C02014G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289574 ID=CX289574; Name=CX289574; organism=Citrus clementina; type=EST; length=487bp
GCACGAGGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAG
AAAACATGAGGGGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCC
GATGCTATCCACAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGT
CATTTATGCATCCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCT
ACTTGGTGGAAATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGT
GTTCTTAACCAGAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGG
TACCCCACTTTATAACATCAAGGCATACCTCCCGGTCGTTGAGTCTTTTG
GATTTTCCAGCACTTTGAGAGCTGCAACCTCTGGACAGGCATTCCCTCAA
TGTGTGTTTGATCACTGGGACATGATGTCATCTGATCCATTGGAGCCGGG
ATCCCAGGCTTCACAACTTGTTTTGGATATTAGGAAG
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