CX289574

Overview
NameCX289574
Unique NameCX289574
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length487
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17
Identity = 50/146 (34.25%), Postives = 80/146 (54.79%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEP 448
            GF+   + G LA E ++G+   + D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG +  +M++ G  +  IK+ +PV E FGF+  +R AT G+      F  ++ + ++ L+P
Sbjct:  570 GFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPAE-LQP 712          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 2.774e-17
Identity = 48/142 (33.80%), Postives = 77/142 (54.23%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSD 436
            GF+   K G LA E  +G+  ++ D   H DAIHRG  Q+IP  R  +  +  +AKP LLEP+  + I  P+  +G     +N +RG +  +M++ G  +  IK  +PV E FGF+  +R AT G+      F  ++ + ++
Sbjct:  570 GFKEGVKGGPLASERAQGVKIKLIDATFHEDAIHRGPSQIIPAIRFGVRDAVSSAKPILLEPMQKIYINTPQDYMGDAIREINNRRGQIV-DMEQEG-DMAIIKGSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPNE 709          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METBF (Elongation factor 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=fusA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.774e-17
Identity = 58/159 (36.48%), Postives = 82/159 (51.57%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            GF+   + G L  E +  +   + D  LH DAIHRG  QVIP +R+ I A  L A   LLEP   V +Q P+  +GG    L  +RG +   M   G  L  I+A +PV E FGF+  +R+AT G+A     F  +D++      P S  + +V  IR+
Sbjct:  563 GFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQVIPASRQAIQAGMLMADDTLLEPYQKVFVQVPQLLMGGATKELQGRRG-IILNMSTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDIV------PTSIQNDIVGQIRE 713          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.624e-17
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 2
Query:   14 FQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQ 388
            F      G LA E + G+   + D  LH D+IHRG  QVIP  R  IY +   AK  LLEPV  V I  P++ +G   + + Q+RG V E+M + G  + ++ A +PV   FGF+S +R+AT G+
Sbjct:  566 FTEVMNRGPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAKRILLEPVQKVFINVPQEEMGSAINEVQQRRG-VIEDMTQEGEEV-SLVARIPVSGMFGFASAIRSATGGK 688          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METST (Elongation factor 2 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=fusA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.624e-17
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQ 388
            GF+ A  +G LA E   GI   + D  +H DA+HRG  QV+P  R+ +Y + + A+P L+EP+  V I  P+  +G     +  +RG + E  Q     +  I++ +PV E FGF+  +R+A  G+
Sbjct:  564 GFESALDDGPLANEKAMGIKISLMDAKIHEDAVHRGPAQVLPAIRKAVYGAIMLAQPTLMEPMQKVYISVPQDYMGAATREVQNRRGQIVEMGQE--GDMSTIESKVPVSEMFGFAGDIRSAAEGR 687          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.624e-17
Identity = 55/158 (34.81%), Postives = 85/158 (53.80%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIR 484
            GF+ A K G LA E  +G+  ++ D V H DAIHRG  Q+IP  R  +  +   A   LLEP+  V I  P+  +G     L+ +RG +  +M++ G  +  IK+  PV E FGF+  +R AT G+      F  ++ + ++ L+P     Q+V +IR
Sbjct:  570 GFKEAVKNGPLAAEKCQGVKVKLMDAVFHEDAIHRGPAQLIPAVRTGVRDAIAQANVGLLEPIQNVYISTPQDYMGDAMKELSNRRGQIL-DMEQEG-DMTTIKSKAPVSEMFGFAGAIRGATQGRCLWSIEFGGFEKVPTE-LQP-----QIVKEIR 719          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.732e-17
Identity = 55/159 (34.59%), Postives = 79/159 (49.69%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            G   A + G LA+E ++ +   + DV LH DAIHRG  QVIP  R  + A  L A   LLEP+  + I  P   +G   S +  +RG V +      T    +   +PV E FGFS  +R+AT G+A     F  ++++      P S    +V+ IRK
Sbjct:  564 GLHEALQGGPLADEPVQNMKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGILYAGDSLLEPIQKISITVPTDQMGNATSQIQGRRGSVLDITSEGDT--ITVVGRVPVAELFGFSGDIRSATEGRAMWNTEFAGFEIV------PNSLVKDVVIAIRK 714          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_HALMA (Elongation factor 2 OS=Haloarcula marismortui GN=fusA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16
Identity = 49/127 (38.58%), Postives = 70/127 (55.12%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQA 391
            G + A  +G LA E ++G    + D  LH DAIHRG  QVIP  R  ++ S + A  +LLEP+  V I  P   +G     +  +RG V ++M + G  L  ++   PV E  GFSS +R+AT G+A
Sbjct:  563 GLEEALDDGPLASEPVQGSLIRLHDARLHEDAIHRGPAQVIPAVREAVHNSLIDASIKLLEPIQQVRIDVPNDHMGAASGEIQGRRGRV-DDMYQEG-DLMVVEGVAPVDEMIGFSSDIRSATEGRA 687          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_NATPD (Elongation factor 2 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=fusA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.349e-16
Identity = 48/127 (37.80%), Postives = 71/127 (55.91%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQA 391
            G + A  +G LA E + G    + D  LH DAIHRG  QVIP  R  ++ + + A+ +LLEP+  V I  P + +G     +  +RG V ++M + G  L  ++   PV E  GFSS +R+AT G+A
Sbjct:  564 GLEEALNDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPAVREAVHNALIDAEIKLLEPIQEVRIDVPNEHMGAASGEIQGRRGRV-DDMYQEG-DLMVVEGVAPVDEMIGFSSDIRSATEGRA 688          
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.006e-16
Identity = 45/127 (35.43%), Postives = 69/127 (54.33%), Query Frame = 2
Query:   11 GFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQA 391
            GF  A  EG LA E +  +   + D  +H D +HRG  Q+ P  R  I+ + + + P L EP   V I  P + +G +   +NQ+RG +  +M++ G  +  I +  PV E FGF+  +R ATSG+A
Sbjct:  564 GFHQAMDEGPLAREPVMKVIVRLVDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVVINVPYEYMGSVSREMNQRRGQLI-DMRQEGEVMI-IISEAPVAEMFGFAGAIRGATSGRA 688          
The following BLAST results are available for this feature:
BLAST of CX289574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
EF2_METM62.124e-1734.25Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METVS2.774e-1733.80Elongation factor 2 OS=Methanococcus vannielii (st... [more]
EF2_METBF2.774e-1736.48Elongation factor 2 OS=Methanosarcina barkeri (str... [more]
EF2_THEVO3.624e-1740.00Elongation factor 2 OS=Thermoplasma volcanium GN=f... [more]
EF2_METST3.624e-1734.92Elongation factor 2 OS=Methanosphaera stadtmanae (... [more]
EF2_META33.624e-1734.81Elongation factor 2 OS=Methanococcus aeolicus (str... [more]
EF2_METPE4.732e-1734.59Elongation factor 2 OS=Methanosphaerula palustris ... [more]
EF2_HALMA1.798e-1638.58Elongation factor 2 OS=Haloarcula marismortui GN=f... [more]
EF2_NATPD2.349e-1637.80Elongation factor 2 OS=Natronomonas pharaonis (str... [more]
EF2_THESM4.006e-1635.43Elongation factor 2 OS=Thermococcus sibiricus (str... [more]

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Properties
Property NameValue
Genbank descriptionC02014G11SK IF1 Citrus clementina cDNA clone C02014G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289574 ID=CX289574; Name=CX289574; organism=Citrus clementina; type=EST; length=487bp
GCACGAGGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAG
AAAACATGAGGGGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCC
GATGCTATCCACAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGT
CATTTATGCATCCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCT
ACTTGGTGGAAATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGT
GTTCTTAACCAGAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGG
TACCCCACTTTATAACATCAAGGCATACCTCCCGGTCGTTGAGTCTTTTG
GATTTTCCAGCACTTTGAGAGCTGCAACCTCTGGACAGGCATTCCCTCAA
TGTGTGTTTGATCACTGGGACATGATGTCATCTGATCCATTGGAGCCGGG
ATCCCAGGCTTCACAACTTGTTTTGGATATTAGGAAG
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