CX289577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_CYACA (ATP synthase subunit beta, chloroplastic OS=Cyanidium caldarium GN=atpB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.451e-38 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG ++TG PI++PVG+ TLGRI NV+GEPIDEKG + + LPIHR AP F + T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 84 RGASAIDTGEPISIPVGKETLGRIFNVLGEPIDEKGPVISNDKLPIHRPAPKFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNVAKAH 190
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_CHLVU (ATP synthase subunit beta, chloroplastic OS=Chlorella vulgaris GN=atpB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.451e-38 Identity = 75/107 (70.09%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG VL++G P+ VPVG TLGRI NV+GEP+D G + T+ LPIHR APAFV+ T+ I +GIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 77 RGMEVLDSGKPLNVPVGAATLGRIFNVLGEPVDNLGPVNTKDQLPIHRSAPAFVDLDTKLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 183
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_CHLAT (ATP synthase subunit beta, chloroplastic OS=Chlorokybus atmophyticus GN=atpB PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 9.451e-38 Identity = 75/107 (70.09%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG VL+TG+P++VPVG TLGRI NV+GEP+D G + + LPIHR+ PAF E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 79 RGMEVLDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVANKSTLPIHRDPPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 185
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_ZYMMO (ATP synthase subunit beta OS=Zymomonas mobilis GN=atpD PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.234e-37 Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RGQ V++TGS I VPVG TLGRIMNV+G P+DE+G + ++ +PIH +AP F EQ+T+ IL TGIKV+DLLAPY +GGK+GLFGGAGVGKTVLI ELINN+AK H Sbjct: 71 RGQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPIHADAPPFTEQSTDTAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGH 177
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_STIHE (ATP synthase subunit beta, chloroplastic OS=Stigeoclonium helveticum GN=atpB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.234e-37 Identity = 75/107 (70.09%), Postives = 86/107 (80.37%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG +TG+P+ VPVG+ TLGRI NV+GEP+D G ++TE LPIHR APAF + T I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 78 RGMDATDTGTPLMVPVGKTTLGRIFNVLGEPVDNLGPVETEQKLPIHRSAPAFTDLDTRLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 184
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_PORPU (ATP synthase subunit beta, chloroplastic OS=Porphyra purpurea GN=atpB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.234e-37 Identity = 76/107 (71.03%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TG+PI+VPVG TLGRI NV+GEP+D G + +E LPIHR APAF + T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 70 RGVEVVDTGAPISVPVGTNTLGRIFNVLGEPVDNLGPVSSESTLPIHRPAPAFTKLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 176
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_POPTR (ATP synthase subunit beta, chloroplastic OS=Populus trichocarpa GN=atpB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.234e-37 Identity = 74/107 (69.16%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TG+P++VPVG TLGRI NV+GEP+D+ G + T+ PIHR APAF++ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 87 RGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTQITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_MAGSA (ATP synthase subunit beta OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpD PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.234e-37 Identity = 76/107 (71.03%), Postives = 91/107 (85.05%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TG+ I +PVG TLGRI+NVIGEPIDE+G + + LPIH +AP FV+Q+TE +ILVTGIKV+DLLAPY +GGKIGL GGAGVGKTVLIMELINN+AKAH Sbjct: 67 RGTEVVDTGAAIQMPVGPETLGRIINVIGEPIDERGPIGNKTTLPIHADAPEFVDQSTETEILVTGIKVIDLLAPYCKGGKIGLCGGAGVGKTVLIMELINNIAKAH 173
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_EMIHU (ATP synthase subunit beta, chloroplastic OS=Emiliania huxleyi GN=atpB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.234e-37 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V+NTG+PITVPVG TLGRI NV+GEP+DE G + LPIHR APAF + T+ + TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+A+AH Sbjct: 70 RGAAVVNTGAPITVPVGVPTLGRIFNVLGEPVDEMGPCEATAGLPIHRAAPAFTDLDTKPSVFETGIKVVDLLAPYKRGGKIGLFGGAGVGKTVLIMELINNIARAH 176
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_DESVM (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=atpD PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.234e-37 Identity = 70/107 (65.42%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG ++TG PI VPVG+ +LGRIMNV+G P+DE G +KT+ YLPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV++ME+INN+AK H Sbjct: 71 RGMEAVDTGKPIMVPVGKASLGRIMNVVGRPVDEMGPIKTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQH 177 The following BLAST results are available for this feature:
BLAST of CX289577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289577 ID=CX289577; Name=CX289577; organism=Citrus clementina; type=EST; length=329bpback to top |