CX289577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_CYAME (ATP synthase subunit beta, chloroplastic OS=Cyanidioschyzon merolae GN=atpB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.390e-35 Identity = 70/107 (65.42%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG + +TG+PI+VPVG+VTLGRI NV+G+ +D G + + PIH++AP+FV+ T+ + TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 64 RGIQAEDTGAPISVPVGKVTLGRIFNVLGDCVDNLGTVTRQAVQPIHKQAPSFVQLETKPSVFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 170
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_CLOBH (ATP synthase subunit beta OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=atpD PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.390e-35 Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG L+TG ++VPVG+ LGR+ NV+G+PID G+ +E PIHR AP+F EQ+ E +I TGIKV+DLLAPYQ+GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 66 RGMEALDTGKSVSVPVGKEVLGRLFNVLGKPIDGAGEFISEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEH 172
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_CLOB6 (ATP synthase subunit beta OS=Clostridium botulinum (strain 657 / Type Ba4) GN=atpD PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.390e-35 Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG L+TG ++VPVG+ LGR+ NV+G+PID G+ +E PIHR AP+F EQ+ E +I TGIKV+DLLAPYQ+GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 66 RGMEALDTGKSVSVPVGKEVLGRLFNVLGKPIDGAGEFISEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEH 172
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_CLOB1 (ATP synthase subunit beta OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=atpD PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.390e-35 Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG L+TG ++VPVG+ LGR+ NV+G+PID G+ +E PIHR AP+F EQ+ E +I TGIKV+DLLAPYQ+GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 66 RGMEALDTGKSVSVPVGKEVLGRLFNVLGKPIDGAGEFISEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEH 172
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_SHEHH (ATP synthase subunit beta OS=Shewanella halifaxensis (strain HAW-EB4) GN=atpD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.734e-35 Identity = 67/107 (62.62%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V+N+GSPI+VPVG TLGRIMNV+G+PIDE G++ + IHREAP++ +Q++ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELINN+AKAH Sbjct: 63 RGLEVVNSGSPISVPVGSATLGRIMNVLGDPIDECGEIGEQERYVIHREAPSYEDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 169
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_PROM3 (ATP synthase subunit beta OS=Prochlorococcus marinus (strain MIT 9303) GN=atpD PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 5.734e-35 Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG L+TGS I+VPVG TLGRI NV+GEP+DE+G + T+ PIHR AP E T+ + TGIKV+DLLAPY++GGK+GLFGGAGVGKTVLI ELINN+AK H Sbjct: 79 RGMEALDTGSAISVPVGEATLGRIFNVLGEPVDEQGPVTTDATAPIHRPAPKLTELETKPTVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEH 185
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_MARMM (ATP synthase subunit beta OS=Maricaulis maris (strain MCS10) GN=atpD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.734e-35 Identity = 74/105 (70.48%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 321 RG V +TG PI VPVG TLGRIM+V G+PIDE GD+ PIHR AP+F EQATE ++L TGIKVVDLL PY +GGKIGLFGGAGVGKTVLI ELINN+AK Sbjct: 66 RGTVVTDTGGPIMVPVGPGTLGRIMSVTGQPIDEAGDVPHTMKAPIHRPAPSFDEQATEAEVLPTGIKVVDLLCPYAKGGKIGLFGGAGVGKTVLIQELINNIAK 170
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_GLOVI (ATP synthase subunit beta OS=Gloeobacter violaceus GN=atpD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.734e-35 Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG + ++TG+PITVPVG+ TLGRI NV+GEPIDE G ++ IHR AP F + T+ +I TGIKV+DLLAPY++GGKIGLFGGAGVGKTVLI ELI+N+AK H Sbjct: 76 RGMKAIDTGAPITVPVGKSTLGRIFNVLGEPIDELGPVEIVDKFSIHRSAPKFTDLVTQPEIFETGIKVIDLLAPYRKGGKIGLFGGAGVGKTVLIQELIHNIAKEH 182
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_DESVV (ATP synthase subunit beta OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=atpD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.734e-35 Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG +TG PI VPVG+ +LGRIMNV+G P+DE G + + LPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV++ME+INN+AK H Sbjct: 71 RGMEASDTGKPIMVPVGKASLGRIMNVVGRPVDELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQH 177
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_DESVH (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=atpD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.734e-35 Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG +TG PI VPVG+ +LGRIMNV+G P+DE G + + LPIHR AP F EQ T+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV++ME+INN+AK H Sbjct: 71 RGMEASDTGKPIMVPVGKASLGRIMNVVGRPVDELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQH 177 The following BLAST results are available for this feature:
BLAST of CX289577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289577 ID=CX289577; Name=CX289577; organism=Citrus clementina; type=EST; length=329bpback to top |