CX289577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_BACV8 (ATP synthase subunit beta OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=atpD PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.412e-33 Identity = 69/107 (64.49%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V+ TG PIT+PVG GR+MNV+GE +D L E PIHRE P F E +T Q++L TGIKV+DLL PY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 74 RGMEVIPTGHPITMPVGNQIKGRLMNVVGEAVDGMRPLSKEGAFPIHREPPKFDELSTVQEVLFTGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINNIAKKH 180
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_ANEMR (ATP synthase subunit beta, plastid OS=Aneura mirabilis GN=atpB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.412e-33 Identity = 70/107 (65.42%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 R VL+TG+P +VPVG TLGRI NV+GE +D G + PIHR AP+F++ T+ I TGIKVVDLL PY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 85 REMEVLDTGAPSSVPVGEATLGRIFNVLGEAVDNLGPVDAGLTSPIHRAAPSFIQLDTKLSIFETGIKVVDLLVPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 191
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_ACTSZ (ATP synthase subunit beta OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=atpD PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.412e-33 Identity = 66/107 (61.68%), Postives = 85/107 (79.44%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V NTG+PI+VPVG TLGRIMNV+GEPID+KG++ E IHREAP++ +Q+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 63 RGLAVKNTGNPISVPVGTKTLGRIMNVLGEPIDQKGEIGAEETWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 169
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_VIBAL (ATP synthase subunit beta OS=Vibrio alginolyticus GN=atpD PE=1 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 1.845e-33 Identity = 66/107 (61.68%), Postives = 85/107 (79.44%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V+NTG+PI+VPVG TLGRIMNV+G+ IDE+G++ E IHR AP++ EQ+ E +L TG+KV+DL+ P+ +GGKIGLFGGAGVGKTV +MELINN+A H Sbjct: 65 RGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEVGAEEVYSIHRSAPSYEEQSNEIALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQH 171
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_ALISL (ATP synthase subunit beta OS=Aliivibrio salmonicida (strain LFI1238) GN=atpD PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.845e-33 Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V NTG+PITVPVG TLGRIMNV+G+ IDE G++ E + IHR AP++ EQA ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGKTV +MELINN+A H Sbjct: 65 RGLTVENTGAPITVPVGTKTLGRIMNVLGDAIDECGEIGAEEHYSIHRAAPSYEEQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQH 171
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_ALHEH (ATP synthase subunit beta OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=atpD PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.845e-33 Identity = 67/107 (62.62%), Postives = 85/107 (79.44%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 R ++V TG PI+VPVG+ TLGRIM+V+GEP+DEKG ++TE IHR AP+F EQA ++L TGIKV+DLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 63 RSEKVSATGKPISVPVGKGTLGRIMDVLGEPVDEKGAVETEERWGIHRSAPSFAEQAGGAELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEH 169
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_VIBVY (ATP synthase subunit beta OS=Vibrio vulnificus (strain YJ016) GN=atpD PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.409e-33 Identity = 65/107 (60.75%), Postives = 85/107 (79.44%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V+NTG+PI+VPVG TLGRIMNV+G+ IDE+G++ E IHR AP++ EQ+ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGKTV +MELINN+A H Sbjct: 65 RGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEELYSIHRPAPSYEEQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQH 171
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_VIBVU (ATP synthase subunit beta OS=Vibrio vulnificus GN=atpD PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.409e-33 Identity = 65/107 (60.75%), Postives = 85/107 (79.44%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V+NTG+PI+VPVG TLGRIMNV+G+ IDE+G++ E IHR AP++ EQ+ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGKTV +MELINN+A H Sbjct: 65 RGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEELYSIHRPAPSYEEQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQH 171
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_SOLUE (ATP synthase subunit beta OS=Solibacter usitatus (strain Ellin6076) GN=atpD PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.409e-33 Identity = 64/107 (59.81%), Postives = 83/107 (77.57%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG + ++ G P+ VPVG TLGR++NVIGEP+DE G + + + PIHR AP+F +Q+T ++ TGIKV+DL+ PY RGGKIGLFGGAGVGKTV+I ELINN+A H Sbjct: 76 RGMQAISLGHPVEVPVGPETLGRVLNVIGEPVDEMGPVNAKKHYPIHRPAPSFEDQSTRLEMFETGIKVIDLIEPYLRGGKIGLFGGAGVGKTVIIQELINNLAMKH 182
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_NEIG2 (ATP synthase subunit beta OS=Neisseria gonorrhoeae (strain NCCP11945) GN=atpD PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.409e-33 Identity = 67/107 (62.62%), Postives = 85/107 (79.44%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V NTGSPITVPVG+ TLGRI++V+G P+DE G + T+ IH+ AP F E ++ ++L TGIKV+DLL P+ +GGK+GLFGGAGVGKTV +MELINN+AKAH Sbjct: 63 RGMTVSNTGSPITVPVGKGTLGRIVDVLGTPVDEAGPIDTDKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 169 The following BLAST results are available for this feature:
BLAST of CX289577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289577 ID=CX289577; Name=CX289577; organism=Citrus clementina; type=EST; length=329bpback to top |