CX289577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_THAPS (ATP synthase subunit beta, chloroplastic OS=Thalassiosira pseudonana GN=atpB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 5.011e-39 Identity = 78/107 (72.90%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG ++ G+PITVPVG TLGRI NVIGEP+DE+GD+ + LPIHR+APAF E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 70 RGVEAVDLGAPITVPVGVPTLGRIFNVIGEPVDEQGDVVVDQTLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 176
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_SCEOB (ATP synthase subunit beta, chloroplastic OS=Scenedesmus obliquus GN=atpB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 5.011e-39 Identity = 78/107 (72.90%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG VL+TG P+ VPVG+ TLGRI NV+GEP+D G +K E LPIHR APAFV+ T I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 76 RGMEVLDTGKPLNVPVGKSTLGRIFNVLGEPVDNLGPVKNEESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 182
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_ALKOO (ATP synthase subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=atpD PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 5.011e-39 Identity = 78/107 (72.90%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG +TG PITVPVGR TLGRI NVIGEP+DEKG + E PIHR AP+F +QAT +IL TGIKVVDL+APY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 68 RGMEAKDTGGPITVPVGRATLGRIFNVIGEPVDEKGAVAAEAKAPIHRPAPSFEDQATSTEILETGIKVVDLIAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKEH 174
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_RICCN (ATP synthase subunit beta OS=Rickettsia conorii GN=atpD PE=3 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 6.545e-39 Identity = 78/107 (72.90%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP F Q+TE ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 68 RGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTHQSTECNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_RHOCA (ATP synthase subunit beta OS=Rhodobacter capsulatus GN=atpD PE=1 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 6.545e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V +TG PITVPVG TLGRI+NVIGEP+DE+GD+ IH+ AP F Q+TE QILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 65 RGAAVSDTGGPITVPVGNATLGRILNVIGEPVDERGDVSKAEARAIHQPAPDFAAQSTESQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVH 171
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_PHATR (ATP synthase subunit beta, chloroplastic OS=Phaeodactylum tricornutum GN=atpB PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 6.545e-39 Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG ++ G+PI VPVG TLGRI NVIGEP+DE+G++K + LPIHR+APAF E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 71 RGVEAIDLGTPINVPVGTPTLGRIFNVIGEPVDEQGEVKYDETLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 177
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_XANP2 (ATP synthase subunit beta OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpD PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.548e-39 Identity = 79/107 (73.83%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V +TG+PI VPVG TLGRIMNVIGEP+DE G ++ E IH+ AP++ EQATE +ILVTGIKVVDLLAPY +GGK+GLFGGAGVGKTVLIMELINNVAKAH Sbjct: 66 RGLEVTDTGAPIQVPVGAGTLGRIMNVIGEPVDELGPIEAEATRGIHQPAPSYAEQATEAEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAKAH 172
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_OCHNE (ATP synthase subunit beta, chloroplastic OS=Ochrosphaera neapolitana GN=atpD PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.548e-39 Identity = 79/107 (73.83%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG VL+TGSPITVPVG TLGRI NV+GEP+DE G E LPIHR AP+F E T+ + TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 70 RGASVLDTGSPITVPVGVPTLGRIFNVLGEPVDELGPCNAESGLPIHRPAPSFTELETKPSVFETGIKVVDLLAPYKRGGKIGLFGGAGVGKTVLIMELINNIAKAH 176
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_FUSNN (ATP synthase subunit beta OS=Fusobacterium nucleatum subsp. nucleatum GN=atpD PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.548e-39 Identity = 74/107 (69.16%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TG PIT+PVG+ LGRI+NV+GEP+D +G L E +LPIHREAP F + TE +I TGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 64 RGMEVIDTGKPITIPVGKAVLGRILNVLGEPVDNQGPLNAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGH 170
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_ERYLH (ATP synthase subunit beta OS=Erythrobacter litoralis (strain HTCC2594) GN=atpD PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.548e-39 Identity = 77/107 (71.96%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RGQ V+NTG+ I+VPVG TLGRIMNV+GEPID +G + + PIH EAPAFV+Q+T+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 73 RGQEVINTGAQISVPVGPKTLGRIMNVVGEPIDMRGPVGADKANPIHAEAPAFVDQSTDAAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGH 179 The following BLAST results are available for this feature:
BLAST of CX289577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289577 ID=CX289577; Name=CX289577; organism=Citrus clementina; type=EST; length=329bpback to top |