CX289577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_KLULA (ATP synthase subunit beta, mitochondrial OS=Kluyveromyces lactis GN=ATP2 PE=3 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 1.904e-38 Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG+ V +TG+PI+VPVGR TLGRI+NVIGEPIDE+G + ++ PIH + P FVEQ+T ++L TGIKVVDLLAPY RGGKIGLFGGAGVGKTV I ELINN+AKAH Sbjct: 99 RGENVSDTGAPISVPVGRETLGRIINVIGEPIDERGPINSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAH 205
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_OLTVI (ATP synthase subunit beta, chloroplastic OS=Oltmannsiellopsis viridis GN=atpB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.487e-38 Identity = 77/107 (71.96%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TG+P+TVPVG TLGRI NV+GEP+D GD+ E LPIHR AP FV+ T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 77 RGMDVVDTGAPLTVPVGTSTLGRIFNVLGEPVDNLGDVSNEGGLPIHRPAPLFVDLDTQLSIFKTGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 183
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_MESSB (ATP synthase subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=atpD PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.487e-38 Identity = 78/107 (72.90%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RGQ V +TG+PI+VPVG LGRI+NVIGEP+DE G + + IH+ AP +VEQ+TE QILVTGIKV+DLLAPY RGGKIGLFGGAGVGKTVLI ELINNVAKAH Sbjct: 112 RGQEVRDTGAPISVPVGPEMLGRIINVIGEPVDEAGPITATEFRGIHQPAPEYVEQSTEAQILVTGIKVLDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAKAH 218
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_SPHWW (ATP synthase subunit beta OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpD PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.248e-38 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RGQ V +TGS I VPVG TLGRI+NVIGEPIDE+G + PIH EAP FV+Q+T+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 71 RGQEVTDTGSQIRVPVGPQTLGRILNVIGEPIDERGPVNATQTSPIHAEAPLFVDQSTDASILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGH 177
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSF (ATP synthase subunit beta OS=Geobacter sp. (strain FRC-32) GN=atpD PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.248e-38 Identity = 77/107 (71.96%), Postives = 88/107 (82.24%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RGQ VL+TG I+VPVGR TLGRI+NVIGEP+DE G + + IHREAP FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 72 RGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNADKEYGIHREAPEFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQH 178
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_GRATL (ATP synthase subunit beta, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=atpB PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.242e-38 Identity = 76/107 (71.03%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V +TG+PITVPVG TLGRI NV+GEP+D GD+++E LPIHR AP+F + T+ I TGIKVVDLLAPY++GGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 71 RGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGDIQSEDSLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAH 177
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_SORBI (ATP synthase subunit beta, chloroplastic OS=Sorghum bicolor GN=atpB PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.541e-38 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TG+P++VPVG TLGRI NV+GEPID G + T PIHR APAF+E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 87 RGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_SACOF (ATP synthase subunit beta, chloroplastic OS=Saccharum officinarum GN=atpB PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.541e-38 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TG+P++VPVG TLGRI NV+GEPID G + T PIHR APAF+E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 87 RGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_SACHY (ATP synthase subunit beta, chloroplastic OS=Saccharum hybrid GN=atpB PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.541e-38 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TG+P++VPVG TLGRI NV+GEPID G + T PIHR APAF+E T+ I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 87 RGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193
BLAST of CX289577 vs. ExPASy Swiss-Prot
Match: ATPB_RICCK (ATP synthase subunit beta OS=Rickettsia canadensis (strain McKiel) GN=atpD PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.541e-38 Identity = 76/107 (71.03%), Postives = 91/107 (85.05%), Query Frame = 1 Query: 7 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 327 RG V++TGSPI +PVG TLGRIMNV+GE ID KG++K+ + I++ AP+F Q++E+ ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 68 RGLEVVDTGSPICIPVGTATLGRIMNVVGESIDGKGEIKSSNVSSIYKPAPSFTNQSSERTILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAH 174 The following BLAST results are available for this feature:
BLAST of CX289577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289577 ID=CX289577; Name=CX289577; organism=Citrus clementina; type=EST; length=329bpback to top |