CX289579

Overview
NameCX289579
Unique NameCX289579
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length488
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_MYCH7 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma hyopneumoniae (strain 7448) GN=gpmI PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.510e-12
Identity = 48/144 (33.33%), Postives = 74/144 (51.39%), Query Frame = 3
Query:   45 IDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQ-----PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAE 461
            ++   G+ +   G R    +ET K+ HVTFF +G      +  LE    I  DS     VQ     P+M A+EI ++  +  + + +  + +N  N DMVGHTGD++AT+ A +  D  +  I    E+    + +TADHGNAE
Sbjct:  308 VENPLGKLISMAGFRQLRLAETQKYAHVTFFVDGG----VELELENSDRILIDS---LKVQSYADFPQMSAVEITDKLLE--VGQNYDFIIMNFANPDMVGHTGDLKATIKAVEILDFQIGRICKWAEEKNFDFFITADHGNAE 442          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_MYCHP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=gpmI PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.334e-11
Identity = 45/142 (31.69%), Postives = 72/142 (50.70%), Query Frame = 3
Query:   42 EIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIID--AIEKVGGIYLVTADHGNAE 461
            E+    G+ L  N ++    +ET K+ HVTFF++G     + +  E  + + S    +F   P M A EI +     I    F  + +N  N DMVGHTG++ AT+ A +  D   + I++  ++      + +TADHGNAE
Sbjct:  302 EVVNPLGKVLESNDIKQLRLAETQKYAHVTFFFDGGVDIEYKN--ENRILVDSLKVDSFADYPHMSAKEITDSLLNNIEKNDF--IIMNYANPDMVGHTGNLNATIEAIEFLDSQFQRILEYVSLNHENVTWFITADHGNAE 439          
The following BLAST results are available for this feature:
BLAST of CX289579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_MYCH73.510e-1233.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCHP1.334e-1131.692,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC02014H04SK IF1 Citrus clementina cDNA clone C02014H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289579 ID=CX289579; Name=CX289579; organism=Citrus clementina; type=EST; length=488bp
GGGAGTTGAAACTTCCCAGTCATTACCTTGTGTCTCCTCCAGAGATAGAC
AGAACATCTGGTGAATATTTAGTGCATAATGGTGTCCGGACTTTTGCTTG
CAGTGAGACTGTCAAGTTTGGACATGTCACTTTCTTCTGGAATGGAAACC
GCTCTGGGTATTTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGT
GATTCTGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGAT
TGCTGAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGC
GTGTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAG
GCAACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCAT
TGATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATG
GCAATGCTGAGGACATGGTCAAGAGGAACAAATCTGGG
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