CX289579

Overview
NameCX289579
Unique NameCX289579
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length488
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_ECOLI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli (strain K12) GN=gpmI PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P  +  T GE++  N       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M
Sbjct:  310 PASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM 451          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_ECOLC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P  +  T GE++  N       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M
Sbjct:  310 PASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM 451          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_ECOL6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O6 GN=gpmI PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P  +  T GE++  N       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M
Sbjct:  310 PASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM 451          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_ECOL5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P  +  T GE++  N       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M
Sbjct:  310 PASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM 451          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_ECOK1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O1:K1 / APEC GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P  +  T GE++  N       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M
Sbjct:  310 PASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM 451          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_ECOHS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O9:H4 (strain HS) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P  +  T GE++  N       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M
Sbjct:  310 PASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM 451          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_ECO57 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O157:H7 GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P  +  T GE++  N       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M
Sbjct:  310 PASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM 451          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_ECO24 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25
Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P  +  T GE++  N       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V+ +  A+E VGG  L+TADHGNAE M
Sbjct:  310 PASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQM 451          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_VIBSL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio splendidus (strain LGP32) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.615e-25
Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSG 488
            P  ++ T GE+L   G      SET K+ HVTFF+NG +   F+    + V  P  +  T+++QP+M A E+ E+   AI   ++  +  N PN DMVGHTG  +A V A ++ DE +  +++AI++  G  L+TADHGNAE MV     G
Sbjct:  308 PASLENTYGEWLSKEGKTQLRISETEKYAHVTFFFNGGKEDEFEGEERQLVASPKVA--TYDLQPEMSAPELTEKLVAAIKGGKYDAIVCNFPNCDMVGHTGVYDAAVKAVESLDECLGKVVEAIKEADGQLLITADHGNAEMMVNPETGG 456          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_SALTY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella typhimurium GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.615e-25
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P  +  T GE++  N       SET K+ HVTFF+NG     F    EE + I S    T+++QP+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  ++ +  A+E VGG  L+TADHGNAE M
Sbjct:  310 PASLANTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEEPFAG--EERILINSPKVATYDLQPEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIEQVTKAVESVGGQLLITADHGNAEQM 451          
The following BLAST results are available for this feature:
BLAST of CX289579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_ECOLI2.768e-2542.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOLC2.768e-2542.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOL62.768e-2542.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOL52.768e-2542.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOK12.768e-2542.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECOHS2.768e-2542.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECO572.768e-2542.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ECO242.768e-2542.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBSL3.615e-2539.072,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALTY3.615e-2541.672,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC02014H04SK IF1 Citrus clementina cDNA clone C02014H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289579 ID=CX289579; Name=CX289579; organism=Citrus clementina; type=EST; length=488bp
GGGAGTTGAAACTTCCCAGTCATTACCTTGTGTCTCCTCCAGAGATAGAC
AGAACATCTGGTGAATATTTAGTGCATAATGGTGTCCGGACTTTTGCTTG
CAGTGAGACTGTCAAGTTTGGACATGTCACTTTCTTCTGGAATGGAAACC
GCTCTGGGTATTTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGT
GATTCTGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGAT
TGCTGAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGC
GTGTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAG
GCAACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCAT
TGATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATG
GCAATGCTGAGGACATGGTCAAGAGGAACAAATCTGGG
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