CX289579

Overview
NameCX289579
Unique NameCX289579
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length488
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_GLOVI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gloeobacter violaceus GN=gpmI PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.060e-24
Identity = 58/152 (38.16%), Postives = 89/152 (58.55%), Query Frame = 3
Query:   12 LPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            LP     +P  +D   G+ + H+G+R F  +ET K+ HVT+F+NG          EE   I S    T++++P+M A E+ + A  AI +R++  + +N  N DMVGHTG+ +ATV A +  D  +  +++A  + GG  L+TADHGNAE M
Sbjct:  301 LPVAVAFAPQSLDNLLGQVIAHHGLRQFRIAETEKYAHVTYFFNGGIETPLPG--EERSMIQSPLVPTYDLKPEMAAREVTDHAVAAIETRQYSLIVINYANPDMVGHTGNFDATVKAVETVDACIGRLVEACVRAGGTMLLTADHGNAELM 450          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_GEOKA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus kaustophilus GN=gpmI PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.060e-24
Identity = 56/145 (38.62%), Postives = 89/145 (61.38%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMV 470
            P  +D T GE L  +G+R    +ET K+ HVTFF +G R   F    E+ + I S    T++++P+M A E+ +   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA++++
Sbjct:  310 PTNLDNTLGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEKFPG--EDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNADEVL 452          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_BACST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus stearothermophilus GN=gpmI PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 3.060e-24
Identity = 56/145 (38.62%), Postives = 89/145 (61.38%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMV 470
            P  +D T GE L  +G+R    +ET K+ HVTFF +G R   F    E+ + I S    T++++P+M A E+ +   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA++++
Sbjct:  310 PTNLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEKFPG--EDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNADEVL 452          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_SERP5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Serratia proteamaculans (strain 568) GN=gpmI PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.997e-24
Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 3
Query:    3 ELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            ++K P  Y   P  +  T GE+L+ +       SET K+ HVTFF+NG     F    E+ V I S    T+++QP+M A E+ ++   AI S ++  +  N PN DMVGHTG  +A V A +  D  +  +++A++ V G  L+TADHGNAE M
Sbjct:  302 DIKAPCAY--PPASLSNTFGEWLMKHDKTQLRISETEKYAHVTFFFNGGVEEPFTG--EDRVLINSPKVATYDLQPEMSAAELTDKLLAAIASGKYDAIICNYPNGDMVGHTGVYDAAVKAVETLDNCIAQVVEAVKAVDGQLLITADHGNAEQM 452          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_METMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanosarcina mazei GN=gpmI PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.997e-24
Identity = 58/144 (40.28%), Postives = 82/144 (56.94%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            P E+    G+ L   G+     +ET K+ HVTFF NG +   +    E+   IPS    T++++P+M A E+ +   K ILS ++  + +N  N DMVGHTGD EA V A +  D  V  I++A+   GG  L+TADHGNAE M
Sbjct:  317 PEELTDVLGKVLSDRGLIQLRIAETEKYAHVTFFLNGGQEKCYSG--EDRCLIPSPKISTYDLKPEMSAYEVTDEVVKRILSGKYDVIILNFANMDMVGHTGDFEAAVKAVETVDNCVGRIVEALRTAGGAALITADHGNAEQM 458          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_CLOTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=gpmI PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.997e-24
Identity = 53/151 (35.10%), Postives = 87/151 (57.62%), Query Frame = 3
Query:   36 PPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSG 488
            P  ++ T GEY+   G+R    +ET K+ HVTFF+NG     ++   E+ + I S    T++++P+M A E+ ++  + I  + +  + +N  N DMVGHTG  EA   A +A DE +  ++ A+ +  G+ L+TADHGN+E M+     G
Sbjct:  309 PESLENTFGEYISKKGLRQLRIAETEKYAHVTFFFNGGVEAVYEG--EDRILINSPKVATYDLKPEMSAYEVTDKVLECINKKEYDVIILNYANPDMVGHTGVFEAAKAAIEAIDECLGKVVPAVLEQNGVVLITADHGNSEQMIDYETGG 457          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_BACV8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=gpmI PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.997e-24
Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = 3
Query:   21 HYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAE 461
            H L     +  T GEYL  NG      +ET K+ HVTFF+NG R   +D+  EE + +PS    T++++P+M A E+ ++  +AI +++F  + VN  N DMVGHTG  +A   A KA DE VK  ++A +      ++ ADHGNA+
Sbjct:  298 HILFDKENVQNTLGEYLAANGKTQLHIAETEKYAHVTFFFNGGRETPYDA--EERILVPSPKVATYDLKPEMSAYEVKDKLVEAIKTQKFDFIVVNYANGDMVGHTGIYDAIEKAVKAIDECVKDTVEAAKANDYEVIIIADHGNAD 442          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_ANAPZ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Anaplasma phagocytophilum (strain HZ) GN=gpmI PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.997e-24
Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = 3
Query:   27 LVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM 467
            L  P EI R+ GE +   G++    +ET KF HVTFF+NG R   F    E+ + IPS    T++++P+M A+EI +   + I S+++    VN  N+DMVGHTG++EA   A    D  ++ +  A    G + L+TADHGNAE M
Sbjct:  288 LFPPREIHRSLGEVISERGLKQLRIAETEKFAHVTFFFNGGREEPFTG--EDRIIIPSPDVSTYDLKPEMSAVEITDSLVERINSQQYALTVVNYANADMVGHTGNMEAAKKAVTTVDSCLQRVFYAAVNAGAVMLITADHGNAEKM 432          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI1_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Methanosarcina acetivorans GN=gpmI1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.997e-24
Identity = 55/143 (38.46%), Postives = 86/143 (60.14%), Query Frame = 3
Query:   42 EIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMV 470
            E+    GE L   G+     +ET K+ HVTFF NG     ++   E+   IPS    T++++P+M A +I +   + I S ++  + +N  N DMVGHTG  EA V A +A D+ +  I++A++++GG+ L+TADHGNAE M+
Sbjct:  313 ELKNVLGEVLSKQGLTQLRIAETEKYAHVTFFLNGGEEKRYEG--EDRCLIPSPKIATYDLKPEMSAYKITDEVVRRIQSGKYDVIVLNFANMDMVGHTGIFEAAVKAVEAVDKCIGRIVEALKEIGGVALITADHGNAEQMI 453          
BLAST of CX289579 vs. ExPASy Swiss-Prot
Match: GPMI_EHRCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia chaffeensis (strain Arkansas) GN=gpmI PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.220e-24
Identity = 58/147 (39.46%), Postives = 90/147 (61.22%), Query Frame = 3
Query:   45 IDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM--VKRN 479
            I  T GE + ++ +     +ET K+ HVTFF+NG R   F++  E+ + IPS S  T+N+ P+M A E+     + I  +++  + +N  N+DMVGHTG+IEAT  A  A D+ +  I++ I+    + ++TADHGNAE+M  VK N
Sbjct:  300 ITNTLGEVIANHKLHQLRIAETEKYAHVTFFFNGGREDTFEN--EDRIIIPSPSVTTYNLMPEMSAKEVTNTVIERIKLQKYSLIILNYANADMVGHTGNIEATKQAITALDQCLNKILNCIQGTNYVLVITADHGNAEEMFDVKNN 444          
The following BLAST results are available for this feature:
BLAST of CX289579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_GLOVI3.060e-2438.162,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOKA3.060e-2438.622,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACST3.060e-2438.622,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SERP53.997e-2438.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METMA3.997e-2440.282,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOTH3.997e-2435.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACV83.997e-2439.462,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ANAPZ3.997e-2440.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI1_METAC3.997e-2438.462,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRCR5.220e-2439.462,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC02014H04SK IF1 Citrus clementina cDNA clone C02014H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289579 ID=CX289579; Name=CX289579; organism=Citrus clementina; type=EST; length=488bp
GGGAGTTGAAACTTCCCAGTCATTACCTTGTGTCTCCTCCAGAGATAGAC
AGAACATCTGGTGAATATTTAGTGCATAATGGTGTCCGGACTTTTGCTTG
CAGTGAGACTGTCAAGTTTGGACATGTCACTTTCTTCTGGAATGGAAACC
GCTCTGGGTATTTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGT
GATTCTGGAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGAT
TGCTGAAAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTGC
GTGTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAG
GCAACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCAT
TGATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATG
GCAATGCTGAGGACATGGTCAAGAGGAACAAATCTGGG
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