CX289584
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289584 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.135e-13 Identity = 37/111 (33.33%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 22 LNASVSVFS*FAGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDD-FVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 351 +N S++V S GD ++K +Q+V+ P+++ +E ++DD F++LACDGIWD M +++L DF+ +L + VC V++ CL + DNM++I++ F Sbjct: 187 VNGSLAV-SRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR-----DNMSVILICF 291
BLAST of CX289584 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.135e-13 Identity = 37/111 (33.33%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 22 LNASVSVFS*FAGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDD-FVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 351 +N S++V S GD ++K +Q+V+ P+++ +E ++DD F++LACDGIWD M +++L DF+ +L + VC V++ CL + DNM++I++ F Sbjct: 187 VNGSLAV-SRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR-----DNMSVILICF 291
BLAST of CX289584 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.144e-12 Identity = 37/110 (33.64%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 22 LNASVSVFS*FAGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 351 +N S++V S GD ++K +Q+V+ P++ + ++D+FVVLACDGIWD MS+++L +F++ +L + VC V++ CL + DNM++++V F Sbjct: 192 VNGSLAV-SRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENVCNWVVDTCLHKGSR-----DNMSIVLVCF 295
BLAST of CX289584 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.494e-12 Identity = 37/110 (33.64%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 22 LNASVSVFS*FAGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 351 +N S++V S GD ++K +Q+V+ P++ + ++D+FVVLACDGIWD MS+++L +F+ +L + VC V++ CL + DNM++++V F Sbjct: 192 VNGSLAV-SRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSR-----DNMSVVLVCF 295
BLAST of CX289584 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.328e-12 Identity = 35/110 (31.82%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 22 LNASVSVFS*FAGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 351 +N S++V S GD ++K +Q+V+ P++ + ++D+F++LACDGIWD MS+++L +F+ +L + VC V++ CL + DNM++++V F Sbjct: 192 VNGSLAV-SRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSR-----DNMSIVLVCF 295
BLAST of CX289584 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 5.677e-12 Identity = 35/99 (35.35%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 58 GDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFK 354 GD K+N+ L E Q++T NPDI ++++ DD +F+V+A +G+W M++Q +VD H++L ++ +CE +++ G DN T+I+V FK Sbjct: 283 GDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQ-------FGLPSGDNTTVILVLFK 374
BLAST of CX289584 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.415e-12 Identity = 34/110 (30.91%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 22 LNASVSVFS*FAGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 351 +N S++V S GD ++K +Q+V+ P++ + ++D+F++LACDGIWD MS+++L +++ +L + VC V++ CL + DNM++++V F Sbjct: 192 VNGSLAV-SRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSR-----DNMSIVLVCF 295
BLAST of CX289584 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 2.818e-11 Identity = 34/98 (34.69%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 61 DMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFK 354 D K+N+ L E Q++T NPDI ++++ DD +F+V+A +G+W M++Q +VD H++L ++ +CE +++ G DN T+I+V FK Sbjct: 428 DFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQ-------FGLPSGDNTTVILVLFK 518 The following BLAST results are available for this feature:
BLAST of CX289584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289584 ID=CX289584; Name=CX289584; organism=Citrus clementina; type=EST; length=475bpback to top |