CX289587

Overview
NameCX289587
Unique NameCX289587
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length443
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: BTF3_CAEEL (Transcription factor BTF3 homolog OS=Caenorhabditis elegans GN=icd-1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.584e-31
Identity = 66/124 (53.23%), Postives = 88/124 (70.97%), Query Frame = 1
Query:   52 VEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPN 420
            ++KL      VR GGKG+ RRKKK +HKT   DDK+LQS LK++ V  IP IEEVN+ KDD  VI F NPKVQ S+ ANT+ V+G+   K++ ++LPGI+NQLGP++L +L+KLA    K  P+
Sbjct:   10 IKKLQAQQEHVRIGGKGTPRRKKKVIHKTAAADDKKLQSNLKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGSADNKQITEMLPGILNQLGPESLTHLKKLANNVTKLGPD 133          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_PHANO (Nascent polypeptide-associated complex subunit beta OS=Phaeosphaeria nodorum GN=EGD1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.188e-30
Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = 1
Query:   46 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAG 426
            M+  KL +M  +VR GGKG+ RRK K VHK++ TDDK+LQ+ LK++ V  I AIEEVN+FK D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G
Sbjct:    1 MDQAKLARMQASVRIGGKGTPRRKVKKVHKSSGTDDKKLQTALKKLNVQPIQAIEEVNMFKSDGNVIHFSAPKVHASVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKEKG 128          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_ASPNC (Nascent polypeptide-associated complex subunit beta OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=egd1 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 6.365e-30
Identity = 67/126 (53.17%), Postives = 92/126 (73.02%), Query Frame = 1
Query:   46 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPN 420
            M+  KL +M  +VR GGKG+ RRK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N
Sbjct:    1 MDQAKLARMQQSVRIGGKGTPRRKVKKVHKSSGADDKKLQATLKKMNVQPIQAIEEVNMFKEDGNVIHFGAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKN 126          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_COCIM (Nascent polypeptide-associated complex subunit beta OS=Coccidioides immitis GN=EGD1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.418e-29
Identity = 67/129 (51.94%), Postives = 94/129 (72.87%), Query Frame = 1
Query:   46 MNVEKLMKMAGAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAG 426
            M+  KL ++  +VR G GKG+ RRK K VHK++ TDDK+LQ++LK++ V  I AIEEVN+FK+D  VI F  PKVQAS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G
Sbjct:    1 MDQAKLARLQQSVRIGTGKGTPRRKTKKVHKSSGTDDKKLQTSLKKLNVQPIQAIEEVNMFKEDGNVIHFAAPKVQASVPSNTFAIYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKKEG 129          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_SCLS1 (Nascent polypeptide-associated complex subunit beta OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=egd1 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 4.126e-29
Identity = 69/131 (52.67%), Postives = 94/131 (71.76%), Query Frame = 1
Query:   46 MNVEKLMKMA--GAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAG 426
            M++EKL +M   G VRTG GKG+ RRK K VHK+T  DDK+LQ++LK++ V  I AIEEVN+FK D  VI F  PKV A++ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G
Sbjct:    1 MDMEKLKRMQARGGVRTGDGKGTPRRKVKNVHKSTGMDDKKLQTSLKKLNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKAEG 131          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_BOTFB (Nascent polypeptide-associated complex subunit beta OS=Botryotinia fuckeliana (strain B05.10) GN=egd1 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 4.126e-29
Identity = 69/131 (52.67%), Postives = 94/131 (71.76%), Query Frame = 1
Query:   46 MNVEKLMKMA--GAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAG 426
            M++EKL +M   G VRTG GKG+ RRK K VHK+T  DDK+LQ++LK++ V  I AIEEVN+FK D  VI F  PKV A++ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G
Sbjct:    1 MDMEKLKRMQARGGVRTGDGKGTPRRKVKNVHKSTGMDDKKLQTSLKKLNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKAEG 131          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_AJECN (Nascent polypeptide-associated complex subunit beta OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD1 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.388e-29
Identity = 66/129 (51.16%), Postives = 93/129 (72.09%), Query Frame = 1
Query:   46 MNVEKLMKMAGAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAG 426
            M+  KL ++  +VR G GKG+ RRK K VHK++ TDDK+LQ++LK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G
Sbjct:    1 MDQAKLARLQQSVRIGKGKGTPRRKTKKVHKSSGTDDKKLQTSLKKLNVQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQSMQKGEG 129          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_ASPTN (Nascent polypeptide-associated complex subunit beta OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=egd1 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 7.037e-29
Identity = 67/138 (48.55%), Postives = 94/138 (68.12%), Query Frame = 1
Query:   46 MNVEKLMKMAGAVRTG------------GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPN 420
            M+  KL +M  +VR G            GKG+ RRK K VHK++  DDK+LQ+TLK++ V  IPA+EEVN+FK+D  VI F NP+V AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N
Sbjct:    1 MDQAKLARMQASVRIGNPPSGPRANRNRGKGTPRRKVKKVHKSSGADDKKLQATLKKMNVQPIPAVEEVNMFKEDGNVIHFGNPRVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKN 138          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_ASPOR (Nascent polypeptide-associated complex subunit beta OS=Aspergillus oryzae GN=egd1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 9.191e-29
Identity = 65/140 (46.43%), Postives = 95/140 (67.86%), Query Frame = 1
Query:    4 SPNSLSPHKNPSSKMNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPN 420
            SP+S      P+S     +  ++  +++  GKG+ RRK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N
Sbjct:   28 SPSSSHTRSTPNSYKPDHESTRLTNSLKNRGKGTPRRKVKKVHKSSGADDKKLQATLKKMNVQPIQAIEEVNMFKEDGNVIHFGAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKN 167          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_EMENI (Nascent polypeptide-associated complex subunit beta OS=Emericella nidulans GN=egd1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.674e-28
Identity = 68/138 (49.28%), Postives = 92/138 (66.67%), Query Frame = 1
Query:   46 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNP------------KVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPN 420
            M+  KL +M  +VR GGKG+ RRK K VHKT+  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  P            KV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N
Sbjct:    1 MDQAKLARMQASVRIGGKGTPRRKVKKVHKTSGADDKKLQATLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKEERALTVGCEIKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKN 138          
The following BLAST results are available for this feature:
BLAST of CX289587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BTF3_CAEEL2.584e-3153.23Transcription factor BTF3 homolog OS=Caenorhabditi... [more]
NACB_PHANO2.188e-3052.34Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPNC6.365e-3053.17Nascent polypeptide-associated complex subunit bet... [more]
NACB_COCIM1.418e-2951.94Nascent polypeptide-associated complex subunit bet... [more]
NACB_SCLS14.126e-2952.67Nascent polypeptide-associated complex subunit bet... [more]
NACB_BOTFB4.126e-2952.67Nascent polypeptide-associated complex subunit bet... [more]
NACB_AJECN5.388e-2951.16Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPTN7.037e-2948.55Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPOR9.191e-2946.43Nascent polypeptide-associated complex subunit bet... [more]
NACB_EMENI2.674e-2849.28Nascent polypeptide-associated complex subunit bet... [more]

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Properties
Property NameValue
Genbank descriptionC02014H12SK IF1 Citrus clementina cDNA clone C02014H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289587 ID=CX289587; Name=CX289587; organism=Citrus clementina; type=EST; length=443bp
TCTTCACCAAATTCTTTGTCCCCACACAAAAACCCTAGCTCCAAGATGAA
TGTGGAGAAGCTAATGAAGATGGCCGGTGCAGTTCGCACTGGTGGTAAGG
GTAGTGTGAGAAGAAAGAAGAAGGCTGTTCATAAGACAACAACCACCGAT
GACAAGAGGCTTCAGAGCACCTTGAAGAGAATAGGAGTGAATGCTATTCC
TGCAATTGAGGAAGTTAACATTTTCAAGGATGACGTCGTTATTCAGTTCT
TAAATCCCAAAGTACAAGCTTCAATTGCTGCCAACACATGGGTAGTTAGT
GGTGCCCCACAAACCAAGAAGTTGCAGGATATTCTCCCTGGAATTATCAA
TCAATTGGGGCCAGATAATTTGGACAACCTGAGGAAGTTGGCGGAGCAGT
TTCAGAAGCAAGCACCTAATGCAGGAACTGGTGCACCCACGAC
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